Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00158 ATGAGATATCCGGAATCTCTGTGTCTCATTGGTTCCTCTGAGACATCATGTTACTCTGCAACAGCCATGGAGTTGTTTCCCACTCCAAGAAACTCAACTGCTGTGCCTTTCCTCTCTGCGCAGGTTGATTATCCTCGCTACTCCGATGTTTCAACCATTGTTAAATCAAGGTCCATGGAGAAGGAGCCAAAAACTGCTCAGTTAACAATTTTTTATGCAGGGCAAGTGGAGGAGATAATGTTATTTGCTAGCAAAGGAGTATCCCAAAATCAAAAATCCTTTGCACATGCTCACACTCATAATAACCAGCAGAAGAATCATCCTTTAGTTATTCCCAATACCACCCCTCAAGTACCACCCAAACCATTTTTTTGTGACATATCAATTGCTAGGAAAGCTTCACTTAGTCGGTTCCTTGAGAAGAGAAAAGATAGAATTGCTGCCAAAGCGTCATATCAAACAAACAATCGCAACTCTTCTAATAAGCTTGGATTATGTGCTAAGCCAACACATATTTGA 519 0.4085 MRYPESLCLIGSSETSCYSATAMELFPTPRNSTAVPFLSAQVDYPRYSDVSTIVKSRSMEKEPKTAQLTIFYAGQVEEIMLFASKGVSQNQKSFAHAHTHNNQQKNHPLVIPNTTPQVPPKPFFCDISIARKASLSRFLEKRKDRIAAKASYQTNNRNSSNKLGLCAKPTHI 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00158 172 PANTHER PROTEIN TIFY 10A 21 158 - -
Cca07g00158 172 Pfam Jas motif 129 153 IPR018467 -
Cca07g00158 172 MobiDBLite consensus disorder prediction 153 172 - -
Cca07g00158 172 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 21 158 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00158 Cca-Chr7 2001319 2002615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00158 56 153 Tify Gene Family AT1G19180 41.228 1.42e-14 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Cca07g00158 Jas_motif 3.5e-12 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00158 K13464 - gmx:100802800 184.882