Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00118 ATGGCTTCCTCCAGTGGAACATCTTCAGGCTCCTCCATGCTTCAAAACTCGGGCTCCGAAGAGAATCTGCAGGCGCTGATGGATCAGCGAAAGAGGAAGAGAATGATCTCGAACCGCGAATCAGCGAGGCGATCTCGCATGAGGAAGCAGAAGCACTTGGACGACCTTGCATCGCTCGTGACACAGCTCAGGAACGAGAACCACCAGATTCTCGCTTCGCTCAATCTCACTACGCACAAGTGCTTGACTCTCGAGTCTCACAACTCTGTGCTGAGAGCGCAGGTGAACGAGTTGAGCCACTGGTTGGAGTCTCTCAACCAGATCATCGACTTCCTCAACGCCACTAACGGGGCTTTTGGGCCCCCGGGCCCACTTTTCGAGCCCGACGGAAGCTGCCTCTTCAACAACGTCCCTTGTCTCACCCAACACATGACTGTTGGGCTTTCTGGGTTTTAG 456 0.5461 MASSSGTSSGSSMLQNSGSEENLQALMDQRKRKRMISNRESARRSRMRKQKHLDDLASLVTQLRNENHQILASLNLTTHKCLTLESHNSVLRAQVNELSHWLESLNQIIDFLNATNGAFGPPGPLFEPDGSCLFNNVPCLTQHMTVGLSGF 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00118 151 MobiDBLite consensus disorder prediction 1 24 - -
Cca07g00118 151 MobiDBLite consensus disorder prediction 1 51 - -
Cca07g00118 151 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 121 - -
Cca07g00118 151 SUPERFAMILY Leucine zipper domain 30 83 IPR046347 GO:0003700|GO:0006355
Cca07g00118 151 Pfam bZIP transcription factor 30 88 IPR004827 GO:0003700|GO:0006355
Cca07g00118 151 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Cca07g00118 151 MobiDBLite consensus disorder prediction 25 51 - -
Cca07g00118 151 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Cca07g00118 151 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Cca07g00118 151 Gene3D - 28 82 - -
Cca07g00118 151 PANTHER BZIP TRANSCRIPTION FACTOR 11-LIKE 1 121 - -
Cca07g00118 151 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00118 Cca-Chr7 1486569 1487686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00118 24 115 bZIP Transcription Factor Family AT4G34590 60.870 2.43e-34 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Cca07g00118 bZIP_1 6.9e-12 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00118 K25786 - gmx:778171 186.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00118 07 1486569 1487686 Cca07g00118 07 1486569 1487686 ECH