Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00106 ATGGCAGCAACACAAGGTGATGTACCAGTTGTGTTTGATAAAGGAATGAATGATTGTGATTTGGGCAGCGATGGCAGAGGTGAGGGCTGCATGACCGGAATCAATGGAGGTGAGAGGTTCCAATTTATTCCCCAGATGATCTTTCTCAACAGTCTATTTGGTTATCTATCTGCTCTCATTATGGTTAAGTGGTGCACTGGTTCTCCAGCTGATTTGTACCATATAATGATCTACATGTTCCTGAGTCCTACAGATGATTGGATGAAGACCAACTCTTTGTTGGTCAGAAAATTCTGCAGCAAGTGTTTTTACTTCTAG 318 0.4214 MAATQGDVPVVFDKGMNDCDLGSDGRGEGCMTGINGGERFQFIPQMIFLNSLFGYLSALIMVKWCTGSPADLYHIMIYMFLSPTDDWMKTNSLLVRKFCSKCFYF 105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00106 105 Pfam V-type ATPase 116kDa subunit family 40 86 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cca07g00106 105 PANTHER VACUOLAR PROTON ATPASES 39 96 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cca07g00106 105 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 39 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00106 Cca-Chr7 1383409 1384114 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00106 39 86 Primary Pumps ATPases(2) AT2G28520 83.333 1.76e-25 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00106 K02154 - qsu:111995652 96.2857