Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00104 ATGTTGAAGAATAGTGTTTCACCGACAGGTTCCTCAGCACGGCCGGATGTAAACATTGACGACCTTGAGATCAATGCAAACAGTGAAAAGTTGCAACGCACTTTCGGTGAACTAGTGGAGTATAAGCTTGTTCTGCAAAAGATCCAGGATACATTGGAGCGGGCACCAGTTGACTCTAACTCCCAACTCAGTGCCATTTTCCAAGTTTTGCAAACTAGGGAGATGCCACCTACCTATTTTCGATCAAATAAATTTACTACTCCATTTCAAGAAAGTATTGATTCATATGGGGTTGCTAAGTATCAGGAGGCAAATCCTACTGTATATACCATAATTACCTTTCCATTTCTTTTTTCTTTTATGTTTGGTGATTGGGGACATGACATATGTTTACTACTGGGAGCTCTTTTTTTCATAATCAGGGAGAAGAAACTTTCTGGCCAGAAGCTTGGAGACATCACAGAGATGACTTTTGGTGGTCGTTATGTAATTATGTTGATGGCAATCTTCTCAATATATACTGGTTTGATCTATTATGAGTTCTTTTCTGTTCCATTTGAACTCTTTGGTCCTTCAGCATATGCCTGTCGTGACCTTTCTTGCAGGGATGCCACTACAATTGGCCTGGTAAAGGTGCGACGCACTTATCCATTTGGAGTGGACCCTGTATGGCATGGTACTCTTAATGAATTACCATTTCTAAACTCATTGAAAAATGAAAATGCCAATTCTTCTTGGGGTTGCCCAAATGAACCTTGGAATTATCATGAGTTATTGCAATGCCAAATTCTTTGGAAGTGGCGTGAATATATGtga 816 0.3983 MLKNSVSPTGSSARPDVNIDDLEINANSEKLQRTFGELVEYKLVLQKIQDTLERAPVDSNSQLSAIFQVLQTREMPPTYFRSNKFTTPFQESIDSYGVAKYQEANPTVYTIITFPFLFSFMFGDWGHDICLLLGALFFIIREKKLSGQKLGDITEMTFGGRYVIMLMAIFSIYTGLIYYEFFSVPFELFGPSAYACRDLSCRDATTIGLVKVRRTYPFGVDPVWHGTLNELPFLNSLKNENANSSWGCPNEPWNYHELLQCQILWKWREYM 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00104 271 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 19 49 - -
Cca07g00104 271 PANTHER VACUOLAR PROTON ATPASES 47 239 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cca07g00104 271 PANTHER VACUOLAR PROTON ATPASES 19 49 IPR002490 GO:0033179|GO:0046961|GO:1902600
Cca07g00104 271 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 47 239 - -
Cca07g00104 271 Pfam V-type ATPase 116kDa subunit family 44 238 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00104 Cca-Chr7 1373825 1378782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00104 1 66 Primary Pumps ATPases(2) AT2G21410 39.241 7.82e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00104 K02154 - gmx:100810062 335.109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00104 07 1373825 1378782 Cca07g00104 07 1373825 1378782 ECH