Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cca07g00092 | ATGGACGTCGAGGACGACCAAGCTCCACCGCTTCACCAACACTCCGATGCACAATGTCTCGCCGACCTCCCCTACGCCGCCGCCGGAGACCCTCTACCCCTCGCCTCAGGGGACTTTAGCCCAGCCCCCGCGCTTGTCGCTGAAGTGGCTACCGCGACCACGCTTGAAACCGATTCAATGACGGAGACGGTGGCCGCCGTACCGGCTGACGACATGATTGAGGAGAAGGGGAATGACGGAACCGATGCGGATGACGTGGCTTTGGAGGCGGGGAACGTGGAAGAGGAAGCGAATTTCACAATTCATGCGGAAGAGGACGAAATTGGGGAGGAAAAGGTGAATGAAGATGCTTTGATGgaagaggaggagggagaagaggaagaacaccaacaaggagaggaggaggaagaagaagaacaccgacatggggaagaggaggaagaagaagaagaacagcaacaaggagaggaagaggaggaagaagaacagcaacaaggtgaagaagaagatgctgatggtgatgctggaatggcaattggagaagacgcagaggagaaggaggagaagagtgcgagtggcgggaagaggaagCGTGGCGCTGGGAAGAATGCTAAGGCTACAGGGAGAGTTGCATCCAGGAAAAAGATGGAAGAGGACGTTTGTTTCATTTGCTTCGACGGGGGTGACCTTGTGCTCTGTGACCGCAGGGGATGCCCCAAGGCTTACCATCCTTCCTGCGTTAATCGTGACGAGGCATTCTTTCGGGCCAAGGGAAAGTGGAATTGCGGTTGGCATCTTTGCAGCATCTGTGAGAAGAATGCGCACTATATGTGTTATACATGTACGTTTTCTTTGTGCAAGGGTTGCATCAAAGATGCGGTTATCTTATGTGTCAGGGGAAACAAAGGCTTTTGCGAGACATGCATGAGAACTGTAATGTTGATTGAACAGAATGAGCAGGGAAACAATGTGGGACAAATAGATTTTGATGACAAAAACAGCTGGGAGTATCTCTTCAAGGACTACTACATAGATCTAAAAGAGAAACTATCTCTAACATTTGATGAAATCACTCAAGCTAAAAACCCTTGGAAGGGATCTGATATGCTTCATTCTAAAGAGGAATCACCAGATGAACTTTTTGATGCCAGTAATGATAAGGAATCAGATTCAGATAGCTCCTATGAGAATGTAGATTTGAGCCGTTCTAAAAGAAGAAAGGGCAAGAAACGGGGAAAGTCCCGCTCCAAAGAAGGAAATTCAAATAGTGCAGTGACAATGGTTGGTGCTGATGGGCCATCTGGAGATGACAGCTTTGAGTGGGCTTCGAAAGAGCTTTTGGAGTTTGTTATGCACATGAGAAATGGAGACAAATCTGTTTTGTCACAGTTTGATGTGCAGGCTCTTTTGTTAGAGTATATTAAAAGAAATAAGCTTCGAGATCCTCGCCGAAAAAGTCAAATTATTTGTGATGCAAGACTTCAAAATCTGTTTGGTAAACCAAGAGTGGGGCATTTTGAAATGTTAAAGCTTCTTGAATCCCATTTCTTTCTAAAAGAGGATTCTCAGGCTGAAGATCTGCAGGGAAGTGTTGTTGACACTGAAATTAGTCATTTGGAAGGTGATGGCAATCCCAATTCATATATGAAAGCTGGCAAAGATAAGAGACGTAAAAATCGTAAAAAGGGTGATGAGAGAGGACTTCAAACTAATGTTGATGATTATGCAGCCATTGATAACCATAATATTAATTTAATTTATCTAAGACGCAATTTGGTGGAAGATCTACTTGAAGATGTAGAGAAGTTTCATGATAAAGTTGTTGGTTCTTTTGTGAGAATAAGAATTTCTGGTAGTGGTCAGAAGCAAGATTTGTATAGGCTGGTTCAGGTTGTAGGTACATGCAAAGCAGCAGAGCCGTATAAAGTTGGTAAAAGGATGACAGATATTTTGCTAGAAATCTTAAATTTAAACAAGACAGAGATTGTATCAATTGATATTATCTCAAATCAGGAGTTCACCGAGGATGAATGCAAGCGTCTTCGCCAAAGCATAAAGTGTGGCCTCATAAATCGGCTAACTGTGGGTGACATTCAAGACAAAGCATTGGTGCTTCAGGCAGTTAGAGTAAAAGATTGGCTAGAAACAGAGATAGTGCGGCTGAGTCACCTCCGTGATAGAGCTAGTGAGAAAGGACGCAGAAAAGAGCTCAGAGAATGTGTAGAGAAGTTGCAGCTTTTGAAAACCCCTGAAGAACGACAACGGAGGTTGGAGGAAATTCCAGAAATACATGTGGATCCAAACATGGATCCAAGTTACGAGTCTGAAGAAGACGAAGATGAAATGGATGATAAAAGACAAGAAAATTACATGAGACCTAGAGGGTCTACTGCCTTTGGAAGGAGGGGGAGAGATATTGTTTCTCCTAGAAGTGGTTCTATTCCAATTGATTCTTGGGGTGGAACGAGGAATTATTCTAATATGAATCCTGAACTCAGCAGAAATTTATCTAATAAGGGATTTCCAATCAAAGGTGACAATGCTTCTAATGCTAATGAGGTACTTCATGATGCTCAATTGCTCCAGGGAAGAGATAGGGAATCCCAACTATCTAATAGCTGGGAGAGGCAAAAGCTTTCCTTGGAAAGTGGTGCTAAAATTACCCAACCATTGGTAACATCCGAGCCTTTCTCTACTGGTGTATTAGAAGCTTCTGCAGCACCATCTTCTGCCGGAATAACTCCTCCAGCTCTGAAAATTAATGAAACCGAAAAGATGTGGCATTACCAGGATCCATCCGGAAAAGTTCAGGGACCATTTTCTATGGTGCAGCTACGCAAATGGAGTAACACAGGATACTTCCCTGCTGATTTGAGGATTTGGAAAACCACTGAGAAGCAAGATGATTCTATACTTCTAAAAGATGCCTTAGCAGGGAATTTTTCTAAGGAACCATCGATGGTGGATAAGGCTCAAGCTGTTCATGATTTACATTACCCATCCTCGCACTCTAGGAAGTCTGTCCAACAAGGTATAGAAGGTCAAGTTGGAGAAAGACAAACATTTGATCAAAATAGTGGATCTTGGAATTCACATAGTACTCTGGGTTCTCCGGGACAAACCACAGGAGTCAGTTGGAGATCTAAAGATAATATGAATTCTTTAGCAAATAGACCTTCTCCATTGGCAGTTGAGGTCCCCAAGAACCCTGCAAATGGCTGGGGTTCTGATGCTGGTGTTAGAAATGAAACAACAAATCTTCCTTCACCTACTCCCCAGACTACTCCTGGTGGGAATAAGGGACAGGCTTTTGAGAATAAATGGTCACCAACACCTGTCCAGTTGCCTGGGTCTCTCATAGGAAATCCATTTCCAGGCAATCATGGAGGTTTGCAGGCCTCTGTGGTAGTGCACCCAGAGCATGCCGTACAAAATGCTGAAAAAGGCTCAAATTCACAACCTAGTATTATTTCAGCTTCTACAGATTCTAATCAGTTACATCCTCAAGCAACAGCAATGGCACCTGTTCTAGCTTCAGTGGTTGACATGAAAATGGCAGGTGCAAATATGCAGAATCAGGTTATGAGTGGCCACAACTCTCATGAAGCTCAAGGGCAAGGGTGGGGTTCCACAGCGGTTTCGAAGCCAGAATCACAGGCCTGGGGAGGTACATTATCTCAAAGGATAGAACCAAATAATCCTGCTACTATGCCTGCCCAGCCAGCTTCCCATGGCCCCTGGGGTGATCCTTCGTCTGTCCAGAACACTGCAGCATTTAGTACTGGAAATCCAACTGGGAGTTTACCCACACCTGGATTTATGGGCATGACTACACCTGAGCCTTGGAGACCACCAGCTTCAAGTAGTCAGTTAAACATTACAGCTCCGTCTGCAGCTCCACCCAATATGCCTTGGGGCATAGGCATGCCAGGAAATCAGAATATGAATTGGAGTGGGGTTGTTCCTCCCAATATGAACGTAAACTGGATACCTCCACAGGTGCCGCCACCTGGAAATTCAAATCCAGGATGGGCTGCTCCTAGTCAGGGGCTACCTCCAGTGAATGGAGTTGGCTGGGTTGGACCGGCTCAAGGACGTTCCCATGTAAATGCAAATGCAGGTTGGGCCGGGCCTGGTCAGGGGTTAGCACCTGGTAGTGCCAATCCTGGTTGGGCCGCACCGGCCGGGAATCCAGGCATGTGGGGAAATGAGCAAGGTCATAATGGAGACAGGTTTCCCAACCAAGGCGATCGTGGTATGCATGGTAGAGACAGGTTTCCCAACAGACAGTCATCATTTGGCGGTGGAGGCAGAGGAGGTTCTTCGAGGCCTCCTTTTGGGGGACAAAGAGGAGTCTGCAAGTATCATGAGAGTGGACATTGCAGGAAGGGGTCTTCTTGTGATTTTCTACATACTTAG | 4419 | 0.4291 | MDVEDDQAPPLHQHSDAQCLADLPYAAAGDPLPLASGDFSPAPALVAEVATATTLETDSMTETVAAVPADDMIEEKGNDGTDADDVALEAGNVEEEANFTIHAEEDEIGEEKVNEDALMEEEEGEEEEHQQGEEEEEEEHRHGEEEEEEEEQQQGEEEEEEEQQQGEEEDADGDAGMAIGEDAEEKEEKSASGGKRKRGAGKNAKATGRVASRKKMEEDVCFICFDGGDLVLCDRRGCPKAYHPSCVNRDEAFFRAKGKWNCGWHLCSICEKNAHYMCYTCTFSLCKGCIKDAVILCVRGNKGFCETCMRTVMLIEQNEQGNNVGQIDFDDKNSWEYLFKDYYIDLKEKLSLTFDEITQAKNPWKGSDMLHSKEESPDELFDASNDKESDSDSSYENVDLSRSKRRKGKKRGKSRSKEGNSNSAVTMVGADGPSGDDSFEWASKELLEFVMHMRNGDKSVLSQFDVQALLLEYIKRNKLRDPRRKSQIICDARLQNLFGKPRVGHFEMLKLLESHFFLKEDSQAEDLQGSVVDTEISHLEGDGNPNSYMKAGKDKRRKNRKKGDERGLQTNVDDYAAIDNHNINLIYLRRNLVEDLLEDVEKFHDKVVGSFVRIRISGSGQKQDLYRLVQVVGTCKAAEPYKVGKRMTDILLEILNLNKTEIVSIDIISNQEFTEDECKRLRQSIKCGLINRLTVGDIQDKALVLQAVRVKDWLETEIVRLSHLRDRASEKGRRKELRECVEKLQLLKTPEERQRRLEEIPEIHVDPNMDPSYESEEDEDEMDDKRQENYMRPRGSTAFGRRGRDIVSPRSGSIPIDSWGGTRNYSNMNPELSRNLSNKGFPIKGDNASNANEVLHDAQLLQGRDRESQLSNSWERQKLSLESGAKITQPLVTSEPFSTGVLEASAAPSSAGITPPALKINETEKMWHYQDPSGKVQGPFSMVQLRKWSNTGYFPADLRIWKTTEKQDDSILLKDALAGNFSKEPSMVDKAQAVHDLHYPSSHSRKSVQQGIEGQVGERQTFDQNSGSWNSHSTLGSPGQTTGVSWRSKDNMNSLANRPSPLAVEVPKNPANGWGSDAGVRNETTNLPSPTPQTTPGGNKGQAFENKWSPTPVQLPGSLIGNPFPGNHGGLQASVVVHPEHAVQNAEKGSNSQPSIISASTDSNQLHPQATAMAPVLASVVDMKMAGANMQNQVMSGHNSHEAQGQGWGSTAVSKPESQAWGGTLSQRIEPNNPATMPAQPASHGPWGDPSSVQNTAAFSTGNPTGSLPTPGFMGMTTPEPWRPPASSSQLNITAPSAAPPNMPWGIGMPGNQNMNWSGVVPPNMNVNWIPPQVPPPGNSNPGWAAPSQGLPPVNGVGWVGPAQGRSHVNANAGWAGPGQGLAPGSANPGWAAPAGNPGMWGNEQGHNGDRFPNQGDRGMHGRDRFPNRQSSFGGGGRGGSSRPPFGGQRGVCKYHESGHCRKGSSCDFLHT | 1472 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cca07g00092 | 1472 | SUPERFAMILY | GYF domain | 916 | 977 | IPR035445 | - | |
| Cca07g00092 | 1472 | SMART | PHD_3 | 220 | 266 | IPR001965 | - | |
| Cca07g00092 | 1472 | MobiDBLite | consensus disorder prediction | 365 | 432 | - | - | |
| Cca07g00092 | 1472 | CDD | Bbox1 | 266 | 292 | - | - | |
| Cca07g00092 | 1472 | SMART | swib_2 | 450 | 521 | IPR019835 | - | |
| Cca07g00092 | 1472 | CDD | GYF | 924 | 979 | IPR003169 | GO:0005515 | |
| Cca07g00092 | 1472 | Gene3D | - | 579 | 707 | IPR036128 | GO:0003677 | |
| Cca07g00092 | 1472 | ProSiteProfiles | SWIB/MDM2 domain profile. | 435 | 518 | IPR003121 | - | |
| Cca07g00092 | 1472 | Pfam | GYF domain | 927 | 967 | IPR003169 | GO:0005515 | |
| Cca07g00092 | 1472 | MobiDBLite | consensus disorder prediction | 1402 | 1451 | - | - |
Showing 1 to 10 of 42 entries
Duplication type information
Functional genes information
Transcription factors information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cca07g00092 | - | - | pvu:PHAVU_009G003300g | 2284.99 |
Showing 1 to 1 of 1 entries