Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00054 ATGCAGATGTGTCTATTTCTCTGCATGGGGGGCAACAGCACAACTTGGATGAACACGGCGGTTCTAGTCACCTGCATCCGCAACTTCCGCCGCAACCGAGGCCCCGTTTCCGGCATTCTCAAAGGCTATGTCGGCTTGAGCACCGCCATATTCACCGACCTCTGTTCTGCTCTCTTCGCCGACGACCCTGCCTCCTTTCTACTCATGCTCGCTCTCCTTCCATTCGCCGTTTGCCTCTCCGGAATCTTTTTCCTCCGCGAGATTCCTCCCGCCGCCGCTCACCAGGACGACCAAGACTCATCCTACTTCGGGGTTTTCAACGCAGTCGCCGTGGTCGTCGCCCTTTACCTCTTGGCTTTCGGGTTCCTGCCCAACCCCAGCGCTCTGGCGTCTGGGGCGTTCGCCGTGGTTTTGGTTGTTCTGTTGGCGGCGCCGTTGGGAATTCCGGTCCACTCTTACTTGAAATCGCGAGGGTTGAAAGCGGGTGTGGATGTGGAGGAAGCGTTGCTTGGCGAAAACGTGAAGGGGGAGAGATTGAACGTGTCAGCGGTGGTGGTGGGGGAGGAGCACACGATATGGGAGGCTCTGAAAACCGTGGATTTTTGGATATTGTTTGTGTCGTTTCTTTGTGGGGTGGGAACGGGTTTGGCGGTTATGAACAATATGGGCCAGATTGGGTTGGCGTTGGGTTATTCGGATGTCTCCCTCTTTGTGTCCTTGACCAGTATTTGGGGCTTTTTCGGTCGGATCATCTCGGGTTCGGTTTCGGAGCACTTCATCAAGAAAGCTGCAACTCCTAGACCTCTTTGGAATGCAGCCTCTCAAATACTGATGGCGGTGGGATACATACTTCTGGCCATGGCTATGCCAGGTTCCCTTTACATAGGGTCCATTATAGTTGGCATATGCTACGGAGTGCGGCTCGCCATCACTGTGCCAACAGCCTCAGAGTTATTTGGCCTCAAATACTATGGTCTCATTTACAACATTCTCATCCTTAACCTTCCCCTTGGTTCTTTCCTTTTTTCTGGTCTGCTTGCTGGCATTCTCTATGATATGGAGGCAACTACCACCGCTGGAGGAGGCAACACTTGTGTTGGAGCTCATTGTTACAGACTAACCTTCATAATCATGACTGCAGCTTGCATTCTTGGCTTCTTCTTAGACATTCTATTGTCAATCAGAACTAAGAAGGTTTACACTAAGATATCTTTGGGCAAAAACTCCAAGAAAAAGTCTGTGACCTCAAGTAGTCGATGA 1260 0.5151 MQMCLFLCMGGNSTTWMNTAVLVTCIRNFRRNRGPVSGILKGYVGLSTAIFTDLCSALFADDPASFLLMLALLPFAVCLSGIFFLREIPPAAAHQDDQDSSYFGVFNAVAVVVALYLLAFGFLPNPSALASGAFAVVLVVLLAAPLGIPVHSYLKSRGLKAGVDVEEALLGENVKGERLNVSAVVVGEEHTIWEALKTVDFWILFVSFLCGVGTGLAVMNNMGQIGLALGYSDVSLFVSLTSIWGFFGRIISGSVSEHFIKKAATPRPLWNAASQILMAVGYILLAMAMPGSLYIGSIIVGICYGVRLAITVPTASELFGLKYYGLIYNILILNLPLGSFLFSGLLAGILYDMEATTTAGGGNTCVGAHCYRLTFIIMTAACILGFFLDILLSIRTKKVYTKISLGKNSKKKSVTSSSR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00054 419 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 179 413 - -
Cca07g00054 419 PANTHER MAJOR FACILITATOR SUPERFAMILY PROTEIN 2 181 - -
Cca07g00054 419 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 179 413 - -
Cca07g00054 419 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 2 181 - -
Cca07g00054 419 Gene3D MFS general substrate transporter like domains 194 400 IPR036259 -
Cca07g00054 419 SUPERFAMILY MFS general substrate transporter 2 399 IPR036259 -
Cca07g00054 419 Pfam Nodulin-like 2 150 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca07g00054 Cca-Chr7 761312 764598 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00054 2 412 Nodulin-like Gene Family AT4G34950 64.889 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00054 - - gmx:100813607 627.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00054 07 761312 764598 Cca07g00054 07 761312 764598 ECH