Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca07g00045 ATGTCTAGCCATGAAGACGACCTCGATCTCCTCCTTTCCCTCCAGGATAGAGTTGTTGACACCCCTCCCGCTTCTCCCTCACCAGTTTACCTCTCCGACGATGAATCGATCAAGCAAAGGGAGAAGCCCGACATGTCCGTATTCAAAAACGCCGTTCAGGATTGCCTTCCCTACGACCCTCCCAAAATGCCCAAACCCACCAACAAACCCGATTCTAATGATTCTCAGGTTGAAAAGTTTTCAGGCCTCAGAATAAGGAACCAATTGTTAACTCCCGCCGAGCTTAAGGAACACTTTTCAGATATTCGTTTTGTTCGGCTATCAGTTATCAAGAATTCGTTGATTGGGGATACACTTTCTGGAAGTTGGGCGACTGTTGGAGTATTGACCGAGAAGGGGAGTCAGAGGACGAGTTCGTCGGGGAAGGGCTATTGCATTTGGAAAATTGGATGTTTGGATGAAAGTACTGTTTCTCTTTTCTTGTTTGGAGATGCTTATCAGAGGAACATGCAAGAACAAGCTGGAACGGTCTTTGCGCTGTTTAATTGTGCTGTCCGCAAGGATAATGCGGGAAATGGTTTTACTTTGAGTATATACTCCCCTAAACAAATTATGAAAATGGGCACCTCTGTTGATTATGGAGTTTGCAAAGGGAAACGAGCGGATGGGATGGCTTGTACTTTGGTCATAAATAGACGTCATGGAACATATTGTAAATATCATAAATCAAAAGCATCAGAGAAGTATTCCACGATGCGAAGTGAACTCAAGGGAGGAAACTTAAGAACAGCGTTTAGGCCAAGGGATTACCTCAAATCAGAAGGAATTTACTTAGTTGATCCTCTTGCTGACAAAACAAACTTAAAGAAGTCTCAGCCAGTGAAATTATTGTCGGTGGATGGTCTCAGAAAGGCATTGAGCAATGCAGGAAAAGTAACAACAACTACTCATTCTCAAGGGATTAGGTTTCTTTCTGAGGTTGCAGGCAAGGCGGATCCGAAAATGAAGAATAAAGGACCAAAGTTTCCCAATGAACAAAACAAATGCATGGAGAAGAGGAAATCATCTTTTCCGAATGTCGGTTCCGCTGGAACCCGACAGCTGGATGTAAAAAGAATAAAACCAGACAAGCAAGTTTTGGCTGATAAAATCCCAAAAAGTACAGAAAAGATGATTGAATTAGATTTTGTTAGTTCGGATGAAGACTTCTGA 1212 0.4274 MSSHEDDLDLLLSLQDRVVDTPPASPSPVYLSDDESIKQREKPDMSVFKNAVQDCLPYDPPKMPKPTNKPDSNDSQVEKFSGLRIRNQLLTPAELKEHFSDIRFVRLSVIKNSLIGDTLSGSWATVGVLTEKGSQRTSSSGKGYCIWKIGCLDESTVSLFLFGDAYQRNMQEQAGTVFALFNCAVRKDNAGNGFTLSIYSPKQIMKMGTSVDYGVCKGKRADGMACTLVINRRHGTYCKYHKSKASEKYSTMRSELKGGNLRTAFRPRDYLKSEGIYLVDPLADKTNLKKSQPVKLLSVDGLRKALSNAGKVTTTTHSQGIRFLSEVAGKADPKMKNKGPKFPNEQNKCMEKRKSSFPNVGSAGTRQLDVKRIKPDKQVLADKIPKSTEKMIELDFVSSDEDF 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca07g00045 403 PANTHER PROTEIN MCM10 HOMOLOG 59 365 IPR040184 GO:0003690|GO:0003697|GO:0006270
Cca07g00045 403 Pfam Primase zinc finger 208 253 IPR015408 GO:0005634|GO:0006260
Cca07g00045 403 Gene3D - 68 242 IPR012340 -
Cca07g00045 403 MobiDBLite consensus disorder prediction 57 76 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca07g00045 17 402 Core DNA Replication Machinery Family AT2G20980 56.888 9.96e-146 417
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca07g00045 K10736 - gmx:100527758 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca07g00045 07 632147 635389 Cca07g00045 07 632147 635389 ECH