Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g02033 ATGTTTCTGAGAAAGTGGCTTGTGGCTCACCCAAAATTTCAAAAAAATCCTGTATACATCGCTGGCGATTCTTACTCCGGTATCCCTGTTCCAGTCATTGTCAAGAAAGTTTCTGATGGTAACACAGCTGGAAATTTACCGCTAATCAACCTCAAAGGTTATGTTCTAGGAAACCCGTTAACCGACTGGAAACATGACTTCAACTCGAGAATTAAGTTTGCTCATAGAGTAGGACTTTTATCTGATGAACTCTACGAGGAAACTAAATTGGATTGTCAAGGAGAGTACGTTTTCCCAAATAAAAGTGAAGCTCGTTGTATTGAGGATCTGGAGATAGTGGGTTTGTGCTTAAAAGACGTTTGCAAGGGCATGGTGTTGGAACCAAGTTGCTCTCTCACTGCGAAGCTGAACAAAATGAACTGGAACCAGGTTGATCTCTCAGATGCTCTCATTTCACAAGTTAATCCTACTTCAGATGCTCTCCTTTTAGACGTTAACCATCCTGGGCGATGGTGCAGGGCTAATAACTATGTGTTCATAGGCATTTGGGCTGACGACAAACAAGTACAAGAAGCTCTACATGTTAGAAACGGAACTAAACAAGAGTGGGAGAGATGCAATTCTAGCTTAGCTTACGTATATGACATAAAGAGTACCGTAGATTATCACCGAAATTTCACCAGCGAAGATCTTAGAGCACTCATCTACAGTGGAGATCATGATATGGTTATTCCGTATCTGGGGACCAATGAATGGATAGAATCTCTGAATTTTACTGTTTCTACTGATGGCGAGTGGAGGCCATGGTTTGTGGAAGGGCAAGTTGCAGGTTATGCAGAGAGATACGTAATGAAAAAGTATAGCATAACATATGCGACTGTAAAGGGAGCAGGGCACACAGCTCCAGAGTACAAGCCGAGGGAATGCTTTGGCATGATTAGTAGATGGCTTGCTTATTACTATCTTTAG 969 0.42 MFLRKWLVAHPKFQKNPVYIAGDSYSGIPVPVIVKKVSDGNTAGNLPLINLKGYVLGNPLTDWKHDFNSRIKFAHRVGLLSDELYEETKLDCQGEYVFPNKSEARCIEDLEIVGLCLKDVCKGMVLEPSCSLTAKLNKMNWNQVDLSDALISQVNPTSDALLLDVNHPGRWCRANNYVFIGIWADDKQVQEALHVRNGTKQEWERCNSSLAYVYDIKSTVDYHRNFTSEDLRALIYSGDHDMVIPYLGTNEWIESLNFTVSTDGEWRPWFVEGQVAGYAERYVMKKYSITYATVKGAGHTAPEYKPRECFGMISRWLAYYYL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g02033 322 PRINTS Carboxypeptidase C serine protease (S10) family signature 289 302 IPR001563 GO:0004185|GO:0006508
Cca06g02033 322 PRINTS Carboxypeptidase C serine protease (S10) family signature 6 31 IPR001563 GO:0004185|GO:0006508
Cca06g02033 322 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 18 2 321 - -
Cca06g02033 322 Pfam Serine carboxypeptidase 2 317 IPR001563 GO:0004185|GO:0006508
Cca06g02033 322 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 2 321 IPR001563 GO:0004185|GO:0006508
Cca06g02033 322 ProSitePatterns Serine carboxypeptidases, histidine active site. 289 306 IPR033124 GO:0004185
Cca06g02033 322 Gene3D alpha/beta hydrolase 1 320 IPR029058 -
Cca06g02033 322 SUPERFAMILY alpha/beta-Hydrolases 2 318 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g02033 Cca-Chr6 35591283 35593110 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g02033 179 318 Calmodulin-binding Proteins AT2G22960 50.350 8.91e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g02033 K16296 - jre:108983123 386.726
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g02033 06 35591283 35593110 Cca06g02033 06 35591283 35593110 ECH