Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g02032 ATGGAAGCAGCTGCAACAGTGACAGCTAATCAACACTACTTGGTTACCAGCAAGTGCATGATAATCTTGTGGACCTTCATTCTCCTATTCACTCTATGTAACCCAGTTGCTTCAAATTCCATTGTCAAGACCTTACCGGGTTTCCCCGGGGAGCTACCATTCCTACTTGAAACTGGGTACATTGGCGTAGGAGAATTAGATGAGATTCAGCTTTTCTATTACTTTGTTGAATCGGAGGGGTGGCCAGCTACTGATCCACTGGTGCTTTGGCTCACTGGAGGACCTGGTTGCTCAGCTCTATCTGGTATCATGTATGAAATCGGTCCAATACGTTTCGACTATGAAAGGTCTATTGAGGAAAACAAACCAGTTTTAGCGTTGAACGAGTACTCCTGGACTAAGGTTGCCAACATTATTTTCTTGGATGCACCGGTTGGCACTGGGTTTTCATATTCAGAAACTTCAGNNNNNNNNNNAAACGTCAGCAGGATACAACACTAG 501 0.4371 MEAAATVTANQHYLVTSKCMIILWTFILLFTLCNPVASNSIVKTLPGFPGELPFLLETGYIGVGELDEIQLFYYFVESEGWPATDPLVLWLTGGPGCSALSGIMYEIGPIRFDYERSIEENKPVLALNEYSWTKVANIIFLDAPVGTGFSYSETSXXXXNVSRIQH 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g02032 166 Pfam Serine carboxypeptidase 46 157 IPR001563 GO:0004185|GO:0006508
Cca06g02032 166 Gene3D alpha/beta hydrolase 36 164 IPR029058 -
Cca06g02032 166 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 25 157 IPR001563 GO:0004185|GO:0006508
Cca06g02032 166 PRINTS Carboxypeptidase C serine protease (S10) family signature 128 140 IPR001563 GO:0004185|GO:0006508
Cca06g02032 166 PRINTS Carboxypeptidase C serine protease (S10) family signature 141 151 IPR001563 GO:0004185|GO:0006508
Cca06g02032 166 PANTHER SERINE CARBOXYPEPTIDASE-LIKE PROTEIN 25 157 - -
Cca06g02032 166 SUPERFAMILY alpha/beta-Hydrolases 42 160 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g02032 Cca-Chr6 35590113 35591254 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g02032 38 65 Calmodulin-binding Proteins AT2G22960 71.429 6.63e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g02032 K16296 - pop:18095169 192.2