Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g02021 ATGAACCCGCACGATGTTGATGATGAAAATAGTGGATATATGGCTCCAGAGTATGCAATGCAAGGATTGTTCTCCGTGAAATCTGATGTCTTCAGTTTTGGTGTTATCTTGCTTGAAATCATCAGCGGGAAAAGAAACAGTGGCTTTTACTTAACCGAACTTGCACCAACCCTGCTGGCATATGCATGGCGACTGTGGAGTGAAGGAAAAGAATTGGACTTTGTAGATCCAATGCTATTGGAATCATGCATTGCCTCTGAAGTCGTAATGTGCATGCACATTGGGCTGCTGTGCGTGCAGGAAAATCCGGAGCACAGGCCCACCATGTCTAATGTGGTGATGCTTCTGGGAAGTAAAGCAAAGCCTCTTCCCCAACCAAGACAACCAGCATTTTCTTTGGGTAGGGTGCCTCGTGTTGATCCATCCACAAGAACTGATCCTTCAGTGAATGAGATGATATTTTCTGATATTTTACCACGATGA 483 0.4472 MNPHDVDDENSGYMAPEYAMQGLFSVKSDVFSFGVILLEIISGKRNSGFYLTELAPTLLAYAWRLWSEGKELDFVDPMLLESCIASEVVMCMHIGLLCVQENPEHRPTMSNVVMLLGSKAKPLPQPRQPAFSLGRVPRVDPSTRTDPSVNEMIFSDILPR 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g02021 160 SUPERFAMILY Protein kinase-like (PK-like) 12 142 IPR011009 -
Cca06g02021 160 Pfam Protein tyrosine and serine/threonine kinase 12 115 IPR001245 GO:0004672|GO:0006468
Cca06g02021 160 Gene3D Transferase(Phosphotransferase) domain 1 7 125 - -
Cca06g02021 160 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 158 - -
Cca06g02021 160 PANTHER CYSTEINE-RICH RECEPTOR-KINASE-LIKE PROTEIN 12 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g02021 Cca-Chr6 35448863 35449465 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g02021 9 160 Receptor kinase-like Gene Family AT4G23140 51.875 3.43e-50 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Cca06g02021 PK_Tyr_Ser-Thr 2.8e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g02021 - - gmx:102669229 264.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g02021 06 35448863 35449465 Cca06g02021 06 35448863 35449465 ECH