Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g02010 ATGACAAGTGCATTATTGCTAAATCTGTCACTATCATTAGTGGTATTATTATTCCTTCTTTCATGTGTAATTCACGAGTGTGAAGGCCAAGGCCCCGAGGCTTTGCCTCCAGCAGCAGAAGCTTGTAACGGAGTTTTCATTTCCTACGACTTTCTCACTCGAAGGAAAGAATTCCCTCGTGTGAAGAACGCCACAGCACAGTCTTGGGCCTTCAATTCCACGGCAACAGTTCTCAACACAGGCAAAGATGTGGTTAAAGCATGGAAGTTGTTCATAGGGTTTCAACATGATGAGATTCTAATTTCTGCCGATGGTGGCAATATATTAGATGGGACTGATTACCCTGCTTTGGTAGGAAATGGCACCACCTTTGTTGGAACTTCTGTGCCAGATTTGGATAGCTCCATCAACACAGCAATGGATTTTTCACAGATTGGAGCCATGATTAACCTTATTGGCACCCAGTTTGGAGTTAAGCCTCCTACAGTTCCTATGCCTAAAACCATAAAGTTGGAAAATGATGGATACAAGTGCCCCCAACCAAGTGTCCGTAAGAGTTCAATGTGGGCGTGTTGTAAAAAAGATCCAAAATTCAAGGCTGTACTTCGAAAGACAAAATTCTTGAGACGCCAAAAAGGGGATCTTTCCATATCCTATGACGTTAATCAAGTGTTTGATAATAATTACATGGTTCAAGTGACCATGGAGAATAATCACCTCTTGGGACGCATGGATCATTGGAACTTGACATGGGAGTGGACACGAGGAGAATTTATATACAGCATGAAAGGTGCTTTCACACGTGACATAGACTACTCAGGTTGCGTCTTTGGTGATGCAGGACAGTATTACAAGGGCATGGATTTCTCTAAAGTCATGAACTGTCAAAAGAATCCAATAATCAGTGACTTGCCTCCAGAGAAAGCTGAGGACCCTGAAATAGGAAAGGTACCTCACTGTTGCAGAAACGGAACTCTTTTACCTCTCCACATGGATCCATCCAAATCCAAGTCCATTTTCAACATGCAAGTGTTCAAAATTCCACCAGACATGAATAAAACAGCAATCTACCCTCCAGAGAAATGGAAAATAATGGGCATTCTAAACCCAGATTATAAATGTGGGCCACCTATTAGAGTGGAACCTGCGAAATTTCCCGAGCCTAGGGGACTTGAAGCAACAGTTTATGCCATTTCAAGTTGGCAAATAGTGTGCAATATCACTAAGCCAACCAAGAGGAAAACTCGTTGTTGCGTTTCTTTCTCTGCTTATTACAACGAGTCTGTAATTCCCTGTAACACATGTGCCTGTGGTTGTGATGATACTAATGTTGATACTAATAAAAAACGTTGTAATCCAAATTCACCTGCAATGCTTCTCCCTCCAGAAGCTCTTCTTGTACCCTTTGATAATAGGTCAGCAAAGACAGTTGCTTGGGCCAAACTTAAGCATTTTAGTATCCCAAAAAGATTGCCATGTGGAGACAATTGTGGAGTCAGCATAAACTGGCACTTGGCTTCAGATTTCAAAGGTGGGTGGAGTGCTAGAATCACTCTCTTCAATTGGCAGACTAGGAATTATGAGAATTGGTTCACTGCACTGCAATTCAAGAGGGCTGCTCGTGGTTATGAAAAAGTGTATTCTTTCAATGGAACATTCCTTCCAAAGCTCAACCATACTATTTTCTTGCAAGGGTTGCAAGGAGCAAACTTTTTGATAGCTCTTGACAATACATCAAACCCTAAGGTGCCAGGAAAACAACAATCTGTTATTTCATTTACTAAGAAGTATACACCAGGCCTTCACATTGCAAAAGGAGATGGGTACCCTTCAAAGGTTCTTTTTAATGGTGAAGAGTGTTCTATTCCTACCCATATCCCTGTGAGGAGTGGAAACCAACGTAATGTAGATTTACAACTCGAACTATTATTTGTAGTTTTAGTTTTTACAATAAGTCAAATACTATTGTATTAA 1974 0.4103 MTSALLLNLSLSLVVLLFLLSCVIHECEGQGPEALPPAAEACNGVFISYDFLTRRKEFPRVKNATAQSWAFNSTATVLNTGKDVVKAWKLFIGFQHDEILISADGGNILDGTDYPALVGNGTTFVGTSVPDLDSSINTAMDFSQIGAMINLIGTQFGVKPPTVPMPKTIKLENDGYKCPQPSVRKSSMWACCKKDPKFKAVLRKTKFLRRQKGDLSISYDVNQVFDNNYMVQVTMENNHLLGRMDHWNLTWEWTRGEFIYSMKGAFTRDIDYSGCVFGDAGQYYKGMDFSKVMNCQKNPIISDLPPEKAEDPEIGKVPHCCRNGTLLPLHMDPSKSKSIFNMQVFKIPPDMNKTAIYPPEKWKIMGILNPDYKCGPPIRVEPAKFPEPRGLEATVYAISSWQIVCNITKPTKRKTRCCVSFSAYYNESVIPCNTCACGCDDTNVDTNKKRCNPNSPAMLLPPEALLVPFDNRSAKTVAWAKLKHFSIPKRLPCGDNCGVSINWHLASDFKGGWSARITLFNWQTRNYENWFTALQFKRAARGYEKVYSFNGTFLPKLNHTIFLQGLQGANFLIALDNTSNPKVPGKQQSVISFTKKYTPGLHIAKGDGYPSKVLFNGEECSIPTHIPVRSGNQRNVDLQLELLFVVLVFTISQILLY 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g02010 657 Pfam COBRA-like protein 229 408 IPR006918 GO:0010215|GO:0031225
Cca06g02010 657 PANTHER COBRA-LIKE PROTEIN 7 14 653 - -
Cca06g02010 657 PANTHER COBRA-LIKE PROTEIN 7 14 653 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g02010 Cca-Chr6 35352163 35354387 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g02010 36 648 COBRA Gene Family AT3G20580 57.512 0.0 751
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g02010 - - gmx:100799716 1118.99