Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g02001 ATGGCAACCGAAAAGGTGGTAGTGAAAGAGCTTCTTCCACTTATAAGAGTCTACAGCGATGGTTCCGTGGACCGTCTCTTAAGTTCTCCAAACGTGCCACCCTCCCTTGAAGACCCCGAAACAGGAGTCTCATCCAAAGACATCGTCATCGCAGACAACCCTTTTCTCTCTGCTCGCATATTCCTTCCAAAGTCCCACAAAAACTCCACCCACAAACTTCCCATCTTCGTTTACTTCCACGGTGGCGCTTTCTGCGTTGAATCTGCTTTTTCCTTTTACGTCCATCGTTATCTCAACATCTTAGCCTCCGAAGCAAACATAATAGCCATCTCCATTGACTTCAGACTCCTCCCACACCACCCTCTTCCCGCGGCCTACCAAGATGGCTGGACCGCGCTACAGTGGATTGCTTCCCATGCCGCCAACAGTGCCAGTGCCACCAACCCCGAGCCATGGTTGGTCAACCACGCTGACTTCACCAAACTCTACGTAGGAGGTGACACCAACGGCGCTAACATTGCACACAACTTGCTGATACGTGCAGGCACAGAGACTCTGCATGGAGATCTCCAAATATTAGGTGGATTACTCTGCTGTCCCTTCTTCTGGGGCTCCAAGCCCATTGGGTCAGAGCCCGTTGAAGAGCACCACCAGAGTTTGGCCATTAAGGTGTGGAGCTTCGTGTATCCCGATGCAGCTGGTGGAATCGATAACCCGAGTATTAACCCTTGTGTTCCCGGGGCACCCTCTTTGGCCACACTTGGGTGCTCTAAGTTGCTTGTTACTATTACTGGGAAGGACGAGTTTAGAGACAGGGATATTCTGTATTACGAGAGCGTTAAGAAAAGTGGGTGGAAAGGTGAAGTTGAACTGTTCGATGCTGGCGATGAGGCGCATGCTTTCCAGATGTTCAAGCCTGAAACTGATCTTGCTAAGGCAATGATCAAACGCTTGGCTTCTTTTCTTGTATGA 972 0.5021 MATEKVVVKELLPLIRVYSDGSVDRLLSSPNVPPSLEDPETGVSSKDIVIADNPFLSARIFLPKSHKNSTHKLPIFVYFHGGAFCVESAFSFYVHRYLNILASEANIIAISIDFRLLPHHPLPAAYQDGWTALQWIASHAANSASATNPEPWLVNHADFTKLYVGGDTNGANIAHNLLIRAGTETLHGDLQILGGLLCCPFFWGSKPIGSEPVEEHHQSLAIKVWSFVYPDAAGGIDNPSINPCVPGAPSLATLGCSKLLVTITGKDEFRDRDILYYESVKKSGWKGEVELFDAGDEAHAFQMFKPETDLAKAMIKRLASFLV 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g02001 323 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 7 322 - -
Cca06g02001 323 SUPERFAMILY alpha/beta-Hydrolases 4 322 IPR029058 -
Cca06g02001 323 PANTHER ARYLACETAMIDE DEACETYLASE 7 322 - -
Cca06g02001 323 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 76 92 IPR002168 GO:0016787
Cca06g02001 323 Gene3D alpha/beta hydrolase 4 323 IPR029058 -
Cca06g02001 323 Pfam alpha/beta hydrolase fold 76 302 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g02001 Cca-Chr6 35210704 35212002 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g02001 7 322 Carbohydrate Esterase AT3G48700 36.196 3.89e-73 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g02001 - K13258 gmx:547489 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g02001 06 35210704 35212002 Cca06g02001 06 35210704 35212002 ECH