Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g02000 ATGTTTTATAACCTTCGAGGCAACATCGAACCACAGTCCTCACAACTCGATTCAAGGCTCTCCAACACCTTGAATCCAAACACAACAAGTCAGCCACCTCTAGGGAAGGATTCACTCACTCTCAAGAAGAAATCGAATCTCCTCTTTCCCCTGAATGGCGTCGGCAACAGAAAAAGAGATAGAAACAGAGATCCTTACTTTTGGGGTTCCACACCCATTGGGTCTGAACCAAACGAGGGTGCCACGCACTTGCATGCTCGGGTTTGGAACTTTGTGTACCCTTGTGCGGCGGGTGGGACCGATGACCCTGCCATTAATCCTTTAGCTCCTGATGCTCCCAGCTTGGCCTCGCTTGGGTGCTCCAAGTTACTTGTTTGTGTTGCCGGAAAAGATGCGCTTAGGGACAGAGGAGTTTGGTACTACGAGGCTGTGAACAACAGTGGGTGGCAAGGTCAAGTGGAAGTGTTTGAGCTTGAAGACGAAGATCATGCTTTTCACATTTACAACACTCACACTCAGAATGCCAACTCTATGATCACACGCTTGGCTTCTTTCCTTGTTTGA 564 0.4858 MFYNLRGNIEPQSSQLDSRLSNTLNPNTTSQPPLGKDSLTLKKKSNLLFPLNGVGNRKRDRNRDPYFWGSTPIGSEPNEGATHLHARVWNFVYPCAAGGTDDPAINPLAPDAPSLASLGCSKLLVCVAGKDALRDRGVWYYEAVNNSGWQGQVEVFELEDEDHAFHIYNTHTQNANSMITRLASFLV 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g02000 187 MobiDBLite consensus disorder prediction 7 36 - -
Cca06g02000 187 Gene3D alpha/beta hydrolase 57 187 IPR029058 -
Cca06g02000 187 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 64 186 - -
Cca06g02000 187 SUPERFAMILY alpha/beta-Hydrolases 89 186 IPR029058 -
Cca06g02000 187 MobiDBLite consensus disorder prediction 1 38 - -
Cca06g02000 187 PANTHER ARYLACETAMIDE DEACETYLASE 64 186 - -
Cca06g02000 187 Pfam alpha/beta hydrolase fold 87 166 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g02000 Cca-Chr6 35200647 35209524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g02000 65 186 Carbohydrate Esterase AT3G48700 36.719 5.02e-22 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g02000 - K13258 ccaj:109800570 308.531