Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01999 ATGAGTTCGACTTGCTCAGCAAGCACGAAGGAGATAACGTTGGAGATTCCAAGCTTGGTACGAGTTTACAACGATGGCACCGTGGAACGCCTCCAAGGCAGTCCATTTGTGGCATCCACACTTGAAGATCCAACAACAGGAGTATCATCCAAAGACGTTGTCATATCAAACAACCCTCCCATCTCTGCTCGTATGTACCTTCCAAACAAAAACGTTCTCAACCACAACAAAGTTCCCATCTTGGTCTATTTTCATGGTGGTGCATTTTTCTTCGAATCTGCCTTCAGCGAACAACACCAGAACTATGTCAACATGCTTGTCTCCGTCACACGTGTCATAGTCGTTTCCGTGGAGTACAGGCTGGCACCAGAGACACCTCTTCCTGCAGCGTACGATGATTGCTGGGATGCTCTTAAATGGGTGGCCAATAAATCCGACACGTGGCTTCTCAAACACGGTGATTTCAACAGAGTTTTCATTGGAGGTGACAGTGCTGGTGCTAATATTGTGCACAACGTTGGCATGCGTGTTGGGGTTGAGGTTTTACCTCGTGGTGTCAAAGTCTTTGGCGCTATTGTTTCTCATCCCTACTTCTTCGGTTCGAAGCCAATTGGGTGTGAAGCGGTTTGCGGGCACGAGGAGAGCGTGGCCTATCGGATTTGGGAATTCGTTTGTCCCAATGGGCCTGGTGGGCTTGACAACCCACTGATAAACCCGTTGGGTAGTGAGGCGGCTTCCTTGGATGGGCTTGGGTGCTCTAAGCTTCTTGTTTGCACTGCTCAAAGAGACATGCTGAGAGAAAGAGCGGTGTCGTACTATGAGGCTGTGAAGAAGAGCAGGTGGCAAGGTGAAGCCGAATTGTTTGAAGTTGAAAGCGAACAACACGTTTTTCACGTCCACAATCCCCACACCGTAAATGCTCACAAGATGCTCCAACGCTTTGCCGATTTTCTCCTCCGCTACAACTAG 969 0.4902 MSSTCSASTKEITLEIPSLVRVYNDGTVERLQGSPFVASTLEDPTTGVSSKDVVISNNPPISARMYLPNKNVLNHNKVPILVYFHGGAFFFESAFSEQHQNYVNMLVSVTRVIVVSVEYRLAPETPLPAAYDDCWDALKWVANKSDTWLLKHGDFNRVFIGGDSAGANIVHNVGMRVGVEVLPRGVKVFGAIVSHPYFFGSKPIGCEAVCGHEESVAYRIWEFVCPNGPGGLDNPLINPLGSEAASLDGLGCSKLLVCTAQRDMLRERAVSYYEAVKKSRWQGEAELFEVESEQHVFHVHNPHTVNAHKMLQRFADFLLRYN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01999 322 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 8 319 - -
Cca06g01999 322 SUPERFAMILY alpha/beta-Hydrolases 12 318 IPR029058 -
Cca06g01999 322 Gene3D alpha/beta hydrolase 4 319 IPR029058 -
Cca06g01999 322 PANTHER ARYLACETAMIDE DEACETYLASE 8 319 - -
Cca06g01999 322 Pfam alpha/beta hydrolase fold 81 298 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01999 Cca-Chr6 35196960 35198314 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01999 11 318 Carbohydrate Esterase AT3G48700 40.367 3.18e-81 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01999 - K13258 gmx:100813532 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01999 06 35196960 35198314 Cca06g01999 06 35196960 35198314 ECH
Cca06g01999 06 35196960 35198314 Cca02g02410 02 45133162 45134918 PCT
Cca02g02408 02 45114756 45116007 Cca06g01999 06 35196960 35198314 PCT