Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01998 ATGGGTTCCCCCAGCAAATACATAGTCGCAGAGATGCCTCCCCTTCTATATATGTTCAATGATGGGTCTATTGAACGTCCCAAAGATCATTCAAGAGTTCCTCCCTCACTGGAAGACCCTGCAACAGGTGTCTCATCCAAAGACATCCTCTTCTCAAACAACCCTTTCCTCTTTGCTCGACTTTACCTTCCAAAGCTAACACAACCTAACCAAAAACTCTCCATTTTGGTCTACTTTCATGGCGGTGCCTTCTGCGGCGAATCAGCATTCTCATGGCACCACAACAAATATTGCAACGTGATAGCTTCTGAGGGAAACGTTTTAATTGTTTCCATAGAGCATAGGAAAGCCCCAGAACATTTTCTGCCAGCAGCTTATGATGATTGTTGGGCTGGTCTCACTTGGGCTGCTTCCCATGCCACCCCAAACCCTACCAACCCTGACATGTGGCTCATCAATCACGCTGATTTTAGCAAAACTTATATTGGGGGTGATAGTAGCGGTGGCAATATTGTTCATAATATTGCCATGCGTGCTGGGGTTGAGGCTTTACCTGGTGGGGTCAAAGTTTATGGTGCTTATCTTAACCACCCTTTCTTTTGGGGTTCAAAGCCAATTGGGGCTGAACCTGTTCAAGAGAGACCTCAGTCTTTGCTTTGGAAGTTTGTGTATCCTGATGCACCTGGAGGGTTAGATAACCCCATGATCAATCCACTCGCTCCCGAGGCACCTAGCTTGGCTCATCTTGGATGTTCTAAGATGCTTGTTACTGTGGCTGGTAAGGATCACCTGCACTTTAACCATAGGGCAGTGTTGTACTATAAGGCTGTGAAGGAGAGTGGATGGAAAGGGCAAGTGGAACTCTTTGAAGAGGAAGAAGAGGATCATGTTTATTACATGTATGATATAGAAACTGAGCAAGCCAAAAAACTTGTAACAATCGTCGCTAATTTCCTTCGCCACTGA 966 0.4565 MGSPSKYIVAEMPPLLYMFNDGSIERPKDHSRVPPSLEDPATGVSSKDILFSNNPFLFARLYLPKLTQPNQKLSILVYFHGGAFCGESAFSWHHNKYCNVIASEGNVLIVSIEHRKAPEHFLPAAYDDCWAGLTWAASHATPNPTNPDMWLINHADFSKTYIGGDSSGGNIVHNIAMRAGVEALPGGVKVYGAYLNHPFFWGSKPIGAEPVQERPQSLLWKFVYPDAPGGLDNPMINPLAPEAPSLAHLGCSKMLVTVAGKDHLHFNHRAVLYYKAVKESGWKGQVELFEEEEEDHVYYMYDIETEQAKKLVTIVANFLRH 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01998 321 Coils Coil 319 321 - -
Cca06g01998 321 Pfam alpha/beta hydrolase fold 76 299 IPR013094 GO:0016787
Cca06g01998 321 SUPERFAMILY alpha/beta-Hydrolases 5 320 IPR029058 -
Cca06g01998 321 PANTHER 2-HYDROXYISOFLAVANONE DEHYDRATASE 5 320 - -
Cca06g01998 321 PANTHER ARYLACETAMIDE DEACETYLASE 5 320 - -
Cca06g01998 321 Gene3D alpha/beta hydrolase 20 321 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01998 Cca-Chr6 35174546 35175649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01998 8 320 Carbohydrate Esterase AT3G48690 37.578 4.75e-66 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01998 - K13258 gmx:100814777 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01998 06 35174546 35175649 Cca06g01998 06 35174546 35175649 ECH