Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01989 atgataacagatgctgataagtctactgttagtggacttaatggtgagcagtggcaaacattggtgaatctcttgaataatgtcaaattaggagctgctgaaaaattgactggaccgtatcttgaggacgCTTGTGTGTGTGTGTATTCTCAATTGTTATCGTTGCTTTTGCTTCTCATTCCATCAAATTGTGCTGCGCTAATCAGAATGGTTGAACCTGCATATACTGTGACATCTGATAGTGAAACCACTGGAGAAGAAAAATCAACTACTTTTCCTGAAATAGCTATTGGAATTGATATCGGCACATCACAATGTAGTGTTGCTGTGTGGAATGGTTCCCAAGTGGAGCTTTTGAAGAACACGAGGAATCAGAAGATTATGAAATCATACGTAACCTTCAAGGATAACATTCCTTCTGGTGGAGTTAGTAGTCAACTCTCCCACGAGGACGAGATGTTTTCTGGAGCCGCGATTTTCAACATGAAACGCTTGATTGGCAGAGTTGATACTGACCCAGTTGTCCATGCATGTAAGAATCTTCCATTTCTAGTGCAGACTTTGGACATTGGTGTTCGCCCATTAATTGCCCCATTAGTGAACAATATGTGGAGATCCACCACTCCAGAGGAAGTCCTGGCAATATTTCTGGTGGAATTAAGAGCAATGGCTGAAGCTCAACTGAAACGAAGAATAAGAAATGTGGTTCTTACAGTTCCAGTTTCATTCAGTCGATTTCAGCTAACCAGGATAGAGCGTGCGTGTGCCATGGCTGGCCTTCATGTTCTCAGGTTGATGCCCGAACCTACAGCTGTGGCTTTGTTATATGGACAGCAACAACAGCAGACTTCTCATGAGAATATGGGTAGTGGAAGTGAGAAAATTGCTCTCATTTTCAATATGGGTGCTGGTTATTGTGATGTTGCTGTAACTGCTACAGCGGGAGGAGTATCGCAGATTAAAGCCTTGGCAGGAAGTACCATTGGTGGTGAAGACTTGCTTCAGAATATGATGCAACATCTCTTACCAGATTCTCAAAATCTATTTAAGAATCACGGGATCAAAGAAATTAAACAGATGGGCCTGCTTCGAATTGCAACTCAGGATGCAATTCACAGGCTTTCCTCCCAGTCCTGCACTCAGGTGGATGTAGACTTGGGCGATGGTTTGAAGATATGCAAGGTTGTTGATCGGGAGGTGTTTGAGCAGGTGGATGCTCTTATATCCCAAGGGTGA 1236 0.3883 MITDADKSTVSGLNGEQWQTLVNLLNNVKLGAAEKLTGPYLEDACVCVYSQLLSLLLLLIPSNCAALIRMVEPAYTVTSDSETTGEEKSTTFPEIAIGIDIGTSQCSVAVWNGSQVELLKNTRNQKIMKSYVTFKDNIPSGGVSSQLSHEDEMFSGAAIFNMKRLIGRVDTDPVVHACKNLPFLVQTLDIGVRPLIAPLVNNMWRSTTPEEVLAIFLVELRAMAEAQLKRRIRNVVLTVPVSFSRFQLTRIERACAMAGLHVLRLMPEPTAVALLYGQQQQQTSHENMGSGSEKIALIFNMGAGYCDVAVTATAGGVSQIKALAGSTIGGEDLLQNMMQHLLPDSQNLFKNHGIKEIKQMGLLRIATQDAIHRLSSQSCTQVDVDLGDGLKICKVVDREVFEQVDALISQG 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01989 411 Gene3D - 97 280 - -
Cca06g01989 411 CDD HSP70_NBD 97 404 - -
Cca06g01989 411 Gene3D - 160 215 - -
Cca06g01989 411 PANTHER HEAT SHOCK PROTEIN 70KDA 73 405 IPR013126 GO:0005524|GO:0140662
Cca06g01989 411 SUPERFAMILY Actin-like ATPase domain 293 404 IPR043129 -
Cca06g01989 411 Pfam Hsp70 protein 96 402 IPR013126 GO:0005524|GO:0140662
Cca06g01989 411 SUPERFAMILY Actin-like ATPase domain 95 279 IPR043129 -
Cca06g01989 411 Gene3D Actin; Chain A, domain 4 330 404 - -
Cca06g01989 411 Gene3D - 281 329 - -
Cca06g01989 411 PANTHER HEAT SHOCK 70 KDA PROTEIN 8 73 405 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01989 91 405 Calmodulin-binding Proteins AT1G16030 33.333 1.36e-45 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01989 K09489 - gmx:100809773 620.542