Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cca06g01987 | ATGGCTACCAAATTTCTGGTTATTTTTCTTTTATGTTCCTTTGTTCTAAGGAAGGCTAACTCAATTGAACTAGGGTCCAGCTTTGTCGCTGGCACCAATTCATCTTGGCGATCATCCTCTGGTGATTATGCCTTTGGCTTCTATCACCTTCGTAGTGGCCGTTATCTAGTTGGAATTTGGTTTGACAAGATTCCACAGAAAACACTGGTTTGGTCTGCAAACCGTGACAAACCGGTTGAAATTGGATCGACCATCAATCTCACACGAAGTGGTCAATTTTTGCTCCAACCTATCAATGGTGCTTTATTTCCAATATACAATGGAACAAACACAACTTCTGCGGTGATGCAGAACGATGGGAATTTCGTCTTGATGGATTCACTTTCCAAAGTTATTTGGCAGAGCTTTGATTCACCCACGGATACTCTTCTATTAGGCCAAACTTTGAATACTGGTCAAAAGCTCTTCTCCAATACCAATGGATTCGTAGACTACTCAACAGGGCAATACAGTTTGGAGATCCAATATGATGGCAACATTCTTCTTAAAGCTTATCGGTACACAGATTCTGCCTACTGGTGGAGTGACACTACCCAAAACAAAGGTGTGCGAATTGTTTTTAACAAAACAACAGCTTCTCTTTACGCGGTTAATGACACCAACCAAATCATATATAACATGTTGGAAACTCAGGAAATAGGTACAATCGAAGATTACTACCATCGTGCGCTGGTCAATGACCAGGGAAATTTTCAGAAGTTGATTTACCCAAAAGAAAATGGAAGTGAGTGGATTGTTGAGGGGAAGGTCGTGGAAAAGCCTTGCACTATAACGGCCCTTTGTGGGGTGTATGGCTTTTGCAATGGTTCTGACAACGAAACATATAGTTGTGAATGCTTGCCTGGCTATACTCATTTTGATCCAAGTGCACCCTCCAAAGGGTGCTATCTTAGTCAGGCCAAGGACTTGTGTGCTGCAAATTCCTCTACCCCAAACTTCAAGGTGGAAGTGAAAGAAGTTCAAGATGCTGATATAATACCAAACGATGGCCTTTTTTTTCTTAATCTAGAAGTCATAAATAACGCGGATTTGGAAAGCTGCAAGAAGGAACTGATGGATGACTGTCAATGCATGGCTGCGGTTTTAGAAGACACTGCTTGCTTTAAGAAGAAGTGGCCGATTATAAATGCCGTTAGAATCATCCCAACCACCAGTAATCATGTGATGCTGATTAAAGTTCCTCTGGTTGACAATGAAAAGGATTCATCGTCTTTGGTTGTTTTGATAGTGGCTCTCATCCTTTGCTCATTCCTTGCTGTATTATTTGCAGCTCCTGCCATATATCATCACCCCTTTTGTCTGTATCTCATACACAAAAGGACACCGCCAAAGCCAAAGCCTGTGGATATCAATCTAAAGGCCTTCTCATTCCAGCAGCTAAGAGAAGCAACAAATGGATTCAAGGACAAACTCGGTCGAGGTGCCTATGGTACAGTCTATGGTGGGATTTTAATCTCGGAGGGTCAACAGGTTGAGGTTGCTGTCAAACAATTAGAGCAATTAGAAGACCAAGGTGAGAAAGAATTCGTTACAGAAGTTCAAGTTATTGCTCTCACTCATCATAGAAATCTTGTTGGGTTATTGGGCTTTTGCAATGAGCAGAATCATAGGCTTCTGGTTTATGAGAAAATGGAAAATGGGACACTATCCAACTTTCTTTTTGGGGAAGGGGGTAAACCCAGCTGGGAGGGTAGAGTTAGAATTGTGCTTGAAATTGCCAGAGGCTTGTTATATCTCCATGAAGAGTGTGACCAACAAATCATCCATTGTGACATAAAGCCTCAGAATGTCCTTCTTGACTCAAGCTACACTGCAAAGATTTCTGATTTTGGACTGGCAAAGCTACTGATGAAAGATAAAACTCGAACAAACACCAATGCTAGAGGGACAATGGGATATATGGCACCAGAATGGCTCAAAAATGCACCTGTTACTTCAAAAGTTGATATCTACAGCTTTGGTGTCATGTTGTTGGAAATCATATTTTGCAGAAGGCACATTGAGTTGCATCAAATTGAGGATGAAACAAATGGTGATGACATGATACTCATAGATTGGGTTTTATGTCTGGCAAAAGAAAACAATTTAAGAACCACAGTGATTCATGATCTTGAAGTTGAAAATGATTTCAAGAGGTTCGAAAGAATGACAATGGTTGGTTTATGGTGCATAAATCCCAACCCAACTCTTCGACCATCTATGAAAATGGTGGTACACATGTTGGAAGGAAATATAGAAGTGGGTGTTCCACCAATCAACTGA | 2322 | 0.41 | MATKFLVIFLLCSFVLRKANSIELGSSFVAGTNSSWRSSSGDYAFGFYHLRSGRYLVGIWFDKIPQKTLVWSANRDKPVEIGSTINLTRSGQFLLQPINGALFPIYNGTNTTSAVMQNDGNFVLMDSLSKVIWQSFDSPTDTLLLGQTLNTGQKLFSNTNGFVDYSTGQYSLEIQYDGNILLKAYRYTDSAYWWSDTTQNKGVRIVFNKTTASLYAVNDTNQIIYNMLETQEIGTIEDYYHRALVNDQGNFQKLIYPKENGSEWIVEGKVVEKPCTITALCGVYGFCNGSDNETYSCECLPGYTHFDPSAPSKGCYLSQAKDLCAANSSTPNFKVEVKEVQDADIIPNDGLFFLNLEVINNADLESCKKELMDDCQCMAAVLEDTACFKKKWPIINAVRIIPTTSNHVMLIKVPLVDNEKDSSSLVVLIVALILCSFLAVLFAAPAIYHHPFCLYLIHKRTPPKPKPVDINLKAFSFQQLREATNGFKDKLGRGAYGTVYGGILISEGQQVEVAVKQLEQLEDQGEKEFVTEVQVIALTHHRNLVGLLGFCNEQNHRLLVYEKMENGTLSNFLFGEGGKPSWEGRVRIVLEIARGLLYLHEECDQQIIHCDIKPQNVLLDSSYTAKISDFGLAKLLMKDKTRTNTNARGTMGYMAPEWLKNAPVTSKVDIYSFGVMLLEIIFCRRHIELHQIEDETNGDDMILIDWVLCLAKENNLRTTVIHDLEVENDFKRFERMTMVGLWCINPNPTLRPSMKMVVHMLEGNIEVGVPPIN | 773 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cca06g01987 | 773 | SUPERFAMILY | Protein kinase-like (PK-like) | 465 | 762 | IPR011009 | - | |
Cca06g01987 | 773 | Gene3D | Transferase(Phosphotransferase) domain 1 | 564 | 767 | - | - | |
Cca06g01987 | 773 | Gene3D | - | 13 | 137 | IPR036426 | - | |
Cca06g01987 | 773 | Gene3D | - | 138 | 234 | IPR036426 | - | |
Cca06g01987 | 773 | ProSiteProfiles | Bulb-type lectin domain profile. | 13 | 137 | IPR001480 | - | |
Cca06g01987 | 773 | CDD | B_lectin | 38 | 139 | IPR001480 | - | |
Cca06g01987 | 773 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 607 | 619 | IPR008271 | GO:0004672|GO:0006468 | |
Cca06g01987 | 773 | SMART | serkin_6 | 485 | 761 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca06g01987 | 773 | Pfam | Protein kinase domain | 488 | 759 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca06g01987 | 773 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 | 6 | 772 | - | - | |
Cca06g01987 | 773 | PIRSF | SRK | 1 | 773 | IPR024171 | GO:0004674 | |
Cca06g01987 | 773 | ProSitePatterns | Protein kinases ATP-binding region signature. | 491 | 516 | IPR017441 | GO:0005524 | |
Cca06g01987 | 773 | SMART | blect_4 | 27 | 139 | IPR001480 | - | |
Cca06g01987 | 773 | CDD | STKc_IRAK | 491 | 763 | - | - | |
Cca06g01987 | 773 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 55 | 197 | IPR036426 | - | |
Cca06g01987 | 773 | Pfam | D-mannose binding lectin | 68 | 152 | IPR001480 | - | |
Cca06g01987 | 773 | ProSiteProfiles | Protein kinase domain profile. | 485 | 762 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Cca06g01987 | 773 | Coils | Coil | 504 | 524 | - | - | |
Cca06g01987 | 773 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 6 | 772 | - | - | |
Cca06g01987 | 773 | Pfam | S-locus glycoprotein domain | 237 | 304 | IPR000858 | GO:0048544 | |
Cca06g01987 | 773 | Gene3D | Phosphorylase Kinase; domain 1 | 461 | 562 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Cca06g01987 | Cca-Chr6 | 35051554 | 35053875 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Cca06g01987 | 393 | 770 | Receptor kinase-like Gene Family | AT1G53430 | 38.442 | 1.09e-65 | 234 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_SD-2b | Cca06g01987 | Pkinase | 1.1e-50 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cca06g01987 | - | - | pvu:PHAVU_002G046100g | 1235.32 |