Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01938 ATGGTAAACACAAAAGTGCCTAGTCAACCAAAAATATGCTACAGGCCTATTCGACCTTCTGACCTAGACATTTTAGAGCATATCCATGGCAGATTGTTTCCCATCAGGTATGAATCTACTTTTTTTCATGATGTCGTAAATGGACGTGACATTGTGTCTTGGGGAGCTGTTGACAGCAGTCGGCCGGATGGTCGAAGTGATGAACTCATTGGATTTGTAACGGCACGGATTGTTCTTGCAAAAGAAAGCGAGATAGTGGATATGCTTGGATATGACTCAGCCAAATCTGACCAGACATTAGTCTATGTTCTGACGCTGGGAGTAGTGGAAGCATATAGAAGTCTTGGAATAGCTTCTTCTCTGATTCGGGAGGTCATAAAATATGCTTCAAGTATTCCAACCTGCCGAGCTGTCTACTTGCATGTAATCTCTTACAATAACCCTGCAATCAATTTGTACAAGAAAATGTCTTTCAAGTGTGTGAGAAGGTTGCAGGGATTTTATTTGATCAATGGGCAACATTATGATTCGTTCTTATTCTTGTACTATGTAAATGGGGGACGGTCTCCTTGCTCACCATTAGAGCTTCTCACTGCACTAGTAAGCTACATGAGGAGTGGGTTTAAATCGGTGGCTGCAAGGCTGTGCAAGAACGGAGGCAGAAAGATCTCAAGGCGGACAAAGTGTAAAGAAAGTCATTCTCTTGTGTCAGCACCCAACAAAAGAAACGTTCCAGTCGAGTGTTCTGGTTACGAGTGTGTTTAa 765 0.4261 MVNTKVPSQPKICYRPIRPSDLDILEHIHGRLFPIRYESTFFHDVVNGRDIVSWGAVDSSRPDGRSDELIGFVTARIVLAKESEIVDMLGYDSAKSDQTLVYVLTLGVVEAYRSLGIASSLIREVIKYASSIPTCRAVYLHVISYNNPAINLYKKMSFKCVRRLQGFYLINGQHYDSFLFLYYVNGGRSPCSPLELLTALVSYMRSGFKSVAARLCKNGGRKISRRTKCKESHSLVSAPNKRNVPVECSGYECV 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01938 254 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 12 185 IPR000182 GO:0016407
Cca06g01938 254 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 14 181 IPR016181 -
Cca06g01938 254 CDD NAT_SF 77 141 - -
Cca06g01938 254 Pfam Acetyltransferase (GNAT) family 59 158 IPR000182 GO:0016407
Cca06g01938 254 Gene3D - 5 187 - -
Cca06g01938 254 PANTHER N-ALPHA-ACETYLTRANSFERASE 60 3 231 IPR045141 GO:0004596
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca06g01938 Acetyltransf_1 8.3e-12 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01938 K22767 - gmx:100812509 488.034
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01938 06 34643364 34647831 Cca06g01938 06 34643364 34647831 ECH