Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01892 ATGCACGGAACACCGGGAGAGACGGAACAGATAATAGGATACGGTTTGGGATCCGTATCCATGGACCCGTTCGGGTTAATGGATATACTTGACACTTACTTTCCTCAGCAACTCTTCACCATCGAAGAAACCTGGTTCAATCTCACTTCTGCTCTCGTTTCCTTCTTCTCTTCGCCGACGGGACAAAACCTCGCTTCTCAGGTGAAAAATGATTATGGAAACTATGTCTTGTCACTTGACTTGGAGCAGTTGAAAGGCTTATGTTTTATTAAGGAATTTTATGAAATATTAAAGGAGAAACCTAAAATTGCTCTCTTATGCATGGGTGCTGCCGTTCATAAGGTTTTGCTTTCCAAATGGAAATATCACGATCTGGAGCTTGGTGCAAAGGTAGATATTCGTCTTCATAACTGTCCTGAAACTATGATTGCGCTGAAGAACTTAAAAGCAGCTTACATTGACAAGCTTGTCTCAGTTCGCGGTACTGCTGTGAAAGTCAGCACTGTCAGGCCTCTGGTGGTGGAAATGAGTTTCGAATGCTGTAAATGTAAACAAACAATAACGCGTATATTTCCTGATGGAAAATATTCTCCACCATCTACTTGCAATTTGAATGGCTGCAAGAGCAAAATCTTTAATCCGTTGCGATCAACTGCTCAAACTATTGATTTTCAAAAAATAAGAGTTCAAGAATTATTAAAACCTGAAGACCACGAAGAAGGACGCGTGCCTCGAACAGTGGAATGGTCAGGTTCGGATAAGACATGCCTTGCATTGGGCCAAGGTATGTGCATTGAATCACGGGTTACCGGAAAAATAGCAACAGAAGCTGAAAAATACTCCATTCAGCTTGATGTTGACGAGGGAGGATGA 873 0.4192 MHGTPGETEQIIGYGLGSVSMDPFGLMDILDTYFPQQLFTIEETWFNLTSALVSFFSSPTGQNLASQVKNDYGNYVLSLDLEQLKGLCFIKEFYEILKEKPKIALLCMGAAVHKVLLSKWKYHDLELGAKVDIRLHNCPETMIALKNLKAAYIDKLVSVRGTAVKVSTVRPLVVEMSFECCKCKQTITRIFPDGKYSPPSTCNLNGCKSKIFNPLRSTAQTIDFQKIRVQELLKPEDHEEGRVPRTVEWSGSDKTCLALGQGMCIESRVTGKIATEAEKYSIQLDVDEGG 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01892 290 Pfam MCM OB domain 145 261 IPR033762 -
Cca06g01892 290 PANTHER DNA HELICASE MCM8 26 248 - -
Cca06g01892 290 Gene3D - 172 222 - -
Cca06g01892 290 Gene3D - 145 254 IPR012340 -
Cca06g01892 290 SUPERFAMILY Nucleic acid-binding proteins 71 248 IPR012340 -
Cca06g01892 290 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 26 248 IPR031327 GO:0003677|GO:0005524|GO:0032508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01892 Cca-Chr6 34281008 34285557 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01892 18 248 Core DNA Replication Machinery Family AT3G09660 54.936 5.28e-82 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01892 K10737 - ccaj:109810896 572.392