Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01871 ATGTCTGCCACCGCCTCCGCCCTCACCGACGCCACCAGATTTCCTTCTCATTCCTCTTCATTCGCTCTCACCTCATCCGCCGTTCACTTCCCGCTCCCTCTCCGTATTCGCACTTCTCACTCCAAACCAATTTCTTCAATCAGATGCCAATCGGTTAATACCGATAGGAAGAAGTCAAGTGGAAATCTGCTGGACAAGGCCAGCAACCTCCTCACGGACCTGCTCAGTGGTGGTACTATAGGTTCCATGCCCAAAGCTGAAGGTGCAGTCTCGGATTTGTTAGGTCGACCTCTCTTTTTCTCACTATACGATTGGTTCATCGAGCATGGCTCGGTGTATAAACTTGCATTTGGACCAAAAGCGTTTGTTGTTGTGTCAGATCCCATAGTTGCTAGACATATCCTGCGAGAGAATGCATTTTCTTATGACAAGGGAATGCTTGCTGATATCCTAGAACCAATAATGGGCAAAGGACTTATACCAGCAGACCTTGATACTTGGAAGCAAAGAAGAAGAGTTATTGCTCCTGCTTTCCATAACTCATACTTGGAAGCTATGGTCAAAATATTCACAACTTGTTCAGAAAGAACGATATTGAAGTTTAATAAGCTTCTTGGAGGAGAGGGTTATGATGGAGCTAACTCAATTGAATTGGATCTTGAGGCAGAGTTTTCCAGTTTGGCTCTTGATGTTATTGGGCTTGGTGTGTTCAACTATGACTTTGGTTCTGTCACCAAAGAATCTCCTGTTATTAAGGCTGTCTACGGCACTCTTTTTGAAGCTGAACATAGATCCACTTTCTACATTCCTTATTGGAAAATTCCATTGGCAAAGTGGATAGTCCCAAGGCAAAGAAAGTTTCAGGATGACCTAAAGATTATCAATACTTGTCTTGATGGACTTATCAGAAATGCAAAAGAGAGCAGACAGGAAACAGATGTTGAGAAATTGCAGCAGAGAGATTACATTAATTTGAAGGATGCAAGTCTTCTGCGTTTCCTGGTTGATATGCGGGGAGCTGATGTTGATGATAGTCAGTTGAGGGATGATTTAATGACAATGCTTATTGCTGGTCATGAAACAACGGCTGCTGTTCTTACTTGGGCAGTTTTCCTCCTAGCTCAAAATCCTAGCAAAATGAAGAAGGCTCAAGCAGAGATAGATTTGGTGCTGGGTACGGGGAAGCCAACATTTGAATCACTTAAAACATTGCAGTACATTAGATTGATTGTTGTGGAGGCTCTTCGTTTATACCCCCAACCACCTTTGCTGATCAGACGTTCACTCAACTCTGATGTATATAATCTCCATAGATCTCCATATTTTTGGAACCGTCCGCATGACTTTGAACCAGAGAGATTTCTAGTGCAAAACAAGAATGATGAAATTGAAGGTTGGGCTGGTTTTGACCCATCGAGAAGTCCTGGAGCCTTGTATCCTAACGAG 1446 0.4315 MSATASALTDATRFPSHSSSFALTSSAVHFPLPLRIRTSHSKPISSIRCQSVNTDRKKSSGNLLDKASNLLTDLLSGGTIGSMPKAEGAVSDLLGRPLFFSLYDWFIEHGSVYKLAFGPKAFVVVSDPIVARHILRENAFSYDKGMLADILEPIMGKGLIPADLDTWKQRRRVIAPAFHNSYLEAMVKIFTTCSERTILKFNKLLGGEGYDGANSIELDLEAEFSSLALDVIGLGVFNYDFGSVTKESPVIKAVYGTLFEAEHRSTFYIPYWKIPLAKWIVPRQRKFQDDLKIINTCLDGLIRNAKESRQETDVEKLQQRDYINLKDASLLRFLVDMRGADVDDSQLRDDLMTMLIAGHETTAAVLTWAVFLLAQNPSKMKKAQAEIDLVLGTGKPTFESLKTLQYIRLIVVEALRLYPQPPLLIRRSLNSDVYNLHRSPYFWNRPHDFEPERFLVQNKNDEIEGWAGFDPSRSPGALYPNE 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01871 482 Pfam Cytochrome P450 106 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01871 482 PRINTS E-class P450 group I signature 346 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01871 482 PRINTS E-class P450 group I signature 366 392 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01871 482 PRINTS E-class P450 group I signature 432 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01871 482 PRINTS E-class P450 group I signature 106 125 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01871 482 Gene3D Cytochrome P450 86 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01871 482 PANTHER CYTOCHROME P450 FAMILY 4 78 455 - -
Cca06g01871 482 SUPERFAMILY Cytochrome P450 94 459 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01871 482 PRINTS P450 superfamily signature 357 374 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01871 482 PRINTS P450 superfamily signature 409 420 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01871 482 PANTHER CYTOCHROME P450 97B3, CHLOROPLASTIC 78 455 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01871 Cca-Chr6 34105107 34112370 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01871 14 482 Cytochrome P450 AT4G15110 71.142 0.0 720
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01871 K24543 - gmx:606504 831.247