Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01841 ATGGAACAATTCCGGCATATAGGAGAGGTGGTTGGGAGTCTGAAAGCGCTAATGGTGTTGCGCGACGAAATCCAAATCAACCAACGGCAATGCTGTTTGATTCTGGACATCTTCAGTTTGGCGATGGAGACGATCGCGGAGGAGATACGGCAGAATCTGAAGCTGGAGGAGCGAAACACGAAATGGAAGTGTCTGGAGTATCCTCTGAAGGAGCTATGCAGGGTTTTCAAGGAGGGAGAGCTTTACATAAGGCAGTGTTTGGATTCGAAGGAGTGGTTGGGGAAAGCCCTGACGCTCTCTCAGAACCGCGACTGCGTGGAATTCCACATCCACAACCTGCTCTGCTACTTCCCGGCGGTGGTGGAGGCCATCGAGAGCGCGGGCGAGATCTCAGGCGTGGATCCCGACGAGAAGGGGAAGAAGAAGCTGATGCTGGCTCGGAAGTACGACGTGGAATGGAACGACCCGAAGCTGTTCCAGTGGAGGTACGGGAAACAGTATCTGGTCCCGCGCGAGATCTGCAAGCAGTTGGAAAACGCGTGGCGAGAGGACAGGTGGCGCCTCGTTGAGGCCATCAAGGACAAGACTCAGAGAAAGGCTTCCGCGTTCACCAAAAGCCAGCACCGCCTCGCTGACACGCTTCTCAGGAAACTCGTTAATGGCTCCGAGATGGGCCCAATTGGGGTCCTCGTTGGGTCCAAGGATTACCTCGTCAGACGCAGATTGGGCCGCGGGAGGGAGTTTAAGGAGATCCAATGGCTGGGTCATGGCTTCGCTTTGCGCCAGTTTCAAGCGGAGAGAGAAGCCCACCAGGCAGAGGTTTCGTCTCTTCTCTCGCTCTCTCACCCCAACATACTGCAGTACCTATGCGGCTTTTACGACGAGGAGAAGAAAGAGTTTTCTCTTGTCATGGAGTTGATGAACAAGGATTTAGGAACTTACATGAAAGAGAATTGTGGGCCCAGGAGACAGATTCTCTTCTCTGTCCCTGTCGTCGTCGATCTCATGCTTCAGATGGCCCGAGGCATGGAGTATCTACACTCTAAAAAGATTTGCCATGGACACCTTAACCCTTGCAATATTTTACTCCGGGCCAGGAACTCCCAAGAGGGTTATTTTCAGGCCAAGGTTACAGGTTTTGGCTTATCTTCTTTGCACAAGGGTGATTCCAACGAGGACATAAACCCTTTAACTTGGTATGCCCCTGAAATTCTCACCGAGTTGGAGCAAACAGGGGATGCTTGTGCTTCTACATCAGAGAAATCTGATGCATATAGCTTTGGGATGATATGCTTCGAGTTGTTGACAGGGAAAGTGCCTTTTGAGGATAACCACCTTAAAGGAGATAGAACGAGCCATAACATTAAAGCGGGGGAGAGACCCTTGTTTCCTTACCAATCCCCCAAGTACCTTGTGAGTTTGATAAAAAAGTGTTGGCAAACGGACCCTTCTCAGCGTCCTACATTCTCCTCCATTTGTAGGATTCTGCGTTACACAAAAAAGTTTCTTGCCATGAACCCTGAAGTCAACGTTATTGACCAGCAGCAGGTTCCGCCTGTTGATTGCTGCGACATAGAGGCAACGTTCCTCAAGAGCGTTACGATGGAGAGGACTTCTGTGTCCGCTGTGTCGCAGATACCGTTTGAAATGTTTGCTTATAAAGTTGCTGAGAAAGGTAAAATGAGTCGGAACAATGGTACTAAGGATAAGTGCTGCGACTGCGAGGTCCCCAAGGATGATTCCTCGGCGTGTAAGAGTGAAAGTGATGACCAAAACACAGTGTGTGCTGACGATAACATGTCGGTAGTGGAAGATCCGCTCCCACTAGGAGGAAACTATCCAACCTCTGAATCCCCGTTCAGGAGAACTGATCGAATAAAGAAACAAACACAACTAAAGAACAAAAAAGACCAAGGAACATCAAATAGGCATGCGACAAAATCATTAGCATCATCTAATCGTGTTTTAAGGACGAGTAAGGTGAATCGGTCGTTGTTGGCACCAAGTCCCGGTAGAAGTCGACCTCCCCTAGTCTCTGAATCAGAGCGCAACTCCAAAGGGAATCAATTACCATCAATGTCGATTCCTTCGAGCTCAGTTAGAAGAAAAAAAACTGATGGTAACTTGTCGGATTCTAAGGCCAGTTTAAAGCCCAAAAAAAGGGACCAGTCACCATCATCTACATATGGCAGTGTCTGTGTCACGGATGGATTAAAGATGAAAAAACCACAACTACCATTGAAACCTTCTTCGAGCCCAGCAAGACTAAGACGTGCCAACACTGAGACCAATTTGAAATGTCTCGCGCCAAACCCTGCGTTGAGCACTTCGAAAACATGCACAAGCAAAAAAGGTGGTGCTCATGTCTCAGATATGTATAGTGGTTTAAAGGTGACAAGAGGTAGGTTATCATTGTTCGCATCGAGTCCCTTGAGCTCCCATGAGAGAAGAAGAAAAACAAGTGGTCATGTCTCTGACTCCGAGAGTACTAGTACGAAGAATAGAGAAAGCTTGTCACCATTTACAACGAATCCTTTGAGTCCATATGAGAGCAGAACTTGTGGACATGTCTCGGATTGA 2580 0.4837 MEQFRHIGEVVGSLKALMVLRDEIQINQRQCCLILDIFSLAMETIAEEIRQNLKLEERNTKWKCLEYPLKELCRVFKEGELYIRQCLDSKEWLGKALTLSQNRDCVEFHIHNLLCYFPAVVEAIESAGEISGVDPDEKGKKKLMLARKYDVEWNDPKLFQWRYGKQYLVPREICKQLENAWREDRWRLVEAIKDKTQRKASAFTKSQHRLADTLLRKLVNGSEMGPIGVLVGSKDYLVRRRLGRGREFKEIQWLGHGFALRQFQAEREAHQAEVSSLLSLSHPNILQYLCGFYDEEKKEFSLVMELMNKDLGTYMKENCGPRRQILFSVPVVVDLMLQMARGMEYLHSKKICHGHLNPCNILLRARNSQEGYFQAKVTGFGLSSLHKGDSNEDINPLTWYAPEILTELEQTGDACASTSEKSDAYSFGMICFELLTGKVPFEDNHLKGDRTSHNIKAGERPLFPYQSPKYLVSLIKKCWQTDPSQRPTFSSICRILRYTKKFLAMNPEVNVIDQQQVPPVDCCDIEATFLKSVTMERTSVSAVSQIPFEMFAYKVAEKGKMSRNNGTKDKCCDCEVPKDDSSACKSESDDQNTVCADDNMSVVEDPLPLGGNYPTSESPFRRTDRIKKQTQLKNKKDQGTSNRHATKSLASSNRVLRTSKVNRSLLAPSPGRSRPPLVSESERNSKGNQLPSMSIPSSSVRRKKTDGNLSDSKASLKPKKRDQSPSSTYGSVCVTDGLKMKKPQLPLKPSSSPARLRRANTETNLKCLAPNPALSTSKTCTSKKGGAHVSDMYSGLKVTRGRLSLFASSPLSSHERRRKTSGHVSDSESTSTKNRESLSPFTTNPLSPYESRTCGHVSD 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01841 859 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 685 - -
Cca06g01841 859 MobiDBLite consensus disorder prediction 678 703 - -
Cca06g01841 859 MobiDBLite consensus disorder prediction 807 859 - -
Cca06g01841 859 MobiDBLite consensus disorder prediction 825 859 - -
Cca06g01841 859 PANTHER SERINE-THREONINE PROTEIN KINASE 1 685 - -
Cca06g01841 859 MobiDBLite consensus disorder prediction 643 666 - -
Cca06g01841 859 MobiDBLite consensus disorder prediction 704 720 - -
Cca06g01841 859 Coils Coil 260 280 - -
Cca06g01841 859 Pfam Protein tyrosine and serine/threonine kinase 265 495 IPR001245 GO:0004672|GO:0006468
Cca06g01841 859 SUPERFAMILY Protein kinase-like (PK-like) 235 497 IPR011009 -
Cca06g01841 859 Gene3D Transferase(Phosphotransferase) domain 1 238 517 - -
Cca06g01841 859 MobiDBLite consensus disorder prediction 602 756 - -
Cca06g01841 859 MobiDBLite consensus disorder prediction 620 642 - -
Cca06g01841 859 Pfam Protein of unknown function (DUF1221) 21 233 IPR010632 -
Cca06g01841 859 ProSiteProfiles Protein kinase domain profile. 236 503 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01841 Cca-Chr6 33822210 33826135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01841 273 503 MAP Kinase Kinase Kinase AT1G14000 35.391 3.79e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Cca06g01841 PK_Tyr_Ser-Thr 2.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01841 - - gmx:100778844 1197.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01841 06 33822210 33826135 Cca06g01841 06 33822210 33826135 ECH