Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01836 ATGAACGACGCAGATGTCTCCAAGCAAATCCAGCAGATGGTCCGGTTTATCCGCCAGGAAGCCGAAGAGAAAGCCAACGAGATCTCTGTCTCCGCCGAAGAAGAATTCAACATCGAGAAGTTGCAATTGGTTGAAGCCGACAAAAAGAAGATCCGCCAAGAGTTTGAGCGCAAAGAGAAGCAAGTCGAAATTCGGAAGAAGATTGAGTACTCTATGCAGTTGAATGCTTCTCGGATAAAAGTTCTTCAAGCTCAAGATGACGTGATTAATAACATGAAAGATGCAGCATCCAAGGATCTTTTGCGTGTGAGCCATGATCATCATGTGTACAGGCACCTTTTAAAAGACCTCATCGTTCAGAGTTTGCTGAGGCTGAAAGAGCCATCTGTCTTATTGCGATGTCGGAAAGATGATGTGCATTTGGTAGAGCATGTGTTGGATTCAGCTGCACAAGAATATGCTGAAAAGGCAAATGTTAATCCACCGGAGATCATTGTTGACAACATCCATCTTCCACCTGCCCCCAGCCACCATGATTCCCATGATCCCTACTGCTCTGGAGGAGTGGTGTTGGCTTCTCGAGATGGAAAAATTGTCTGTGAAAATACCCTTGATGCTCGTTTGGATGTAGTGTTTCGTAAAAAGCTTCCAGAGATCCGCAAGCAGCTCTTTGGACAAGTTGCTGTTTAA 690 0.4507 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEADKKKIRQEFERKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVINNMKDAASKDLLRVSHDHHVYRHLLKDLIVQSLLRLKEPSVLLRCRKDDVHLVEHVLDSAAQEYAEKANVNPPEIIVDNIHLPPAPSHHDSHDPYCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEIRKQLFGQVAV 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01836 229 Coils Coil 41 61 - -
Cca06g01836 229 PANTHER ARCHAEAL/VACUOLAR-TYPE H+-ATPASE SUBUNIT E 1 228 - -
Cca06g01836 229 Gene3D - 1 62 - -
Cca06g01836 229 Hamap V-type proton ATPase subunit E [atpE]. 8 225 IPR002842 GO:0033178|GO:0046961|GO:1902600
Cca06g01836 229 Pfam ATP synthase (E/31 kDa) subunit 16 224 IPR002842 GO:0033178|GO:0046961|GO:1902600
Cca06g01836 229 Gene3D - 92 228 IPR038495 -
Cca06g01836 229 SUPERFAMILY V-type ATPase subunit E-like 87 225 - -
Cca06g01836 229 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 228 IPR002842 GO:0033178|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01836 Cca-Chr6 33756276 33760976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01836 1 228 Primary Pumps ATPases(2) AT4G11150 76.856 2.15e-125 352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01836 K02150 - gmx:100500452 392.889
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01836 06 33756276 33760976 Cca06g01836 06 33756276 33760976 ECH