Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01832 ATGGCATCCAATGCTTGCCCGCCGCCAATGAAAGCGACATCAAACGGCGCGTTTCAGGGTGACAACCCTCTTGATTTTGCGCTTCCCCTGCTTATTTTGCAGATATGCCTTGTTCTTGTTGTCTCTAGGGGACTGGCATATATTCTACAACCTTTAAGGCAGCCGAGGGTTATTGCAGAGATTATTGGAGGAATAATTCTTGGGCCGTCAGCGCTTGGACGGAATAAAAGCTATATGAATGCAGTTTTCCCACCCAGGAGTCTTACAGTATTAGATACTCTAGCAAACATTGGCCTTATATTCTTTCTATTCTTAGCAGGCCTGGAGATAGATCCTAAATCTATTCGTCAAACTGGAAAGCGAGTCCTTGCTATTGCTTTGGCTGGAATAAGCCTACCCTTTGTAATAGGAATTGGTTCATCATATGTTCTAAAACAAACAATCGCCAAAGGTTCAGACAGTATTGCATTCCTCGTATTTATGGGTGTTGCTCTGTCCATAACTGCATTTCCTGTGTTGGCCCGAATTTTAGCCGAGTTGAAACTTCTAACCACAAATGTTGGCAGAACAGCGATGTCAGCTGCAGCAATTAATGATATAGCTGCCTGGATTCTGCTTGCTCTCGCTGTTGCCTTGTCAGGCCATGACCGATCTCCAATTGTGTCATTGTGGGTCTTCTTAGCTGGCTGTGGTTTTGTCATTTGTGCAATCCTCATTGTTCCTCCAACTTTCAAATGGATGAGCCAACGATGCCATGAAGGCGAACCAGTTGAAGAGGTATACATATGTGCTACATTAGCTGCTGTTCTGGCTGCTGGCTTTGTCACAGATGCTATTGGAATCCATGCCATGTTTGGTGCATTTGTTGTCGGAATTTTGGTCCCAAAAGATGGACCATTTGCCGGTGCTCTTGTGGAGAAAGTAGAGGATCTTGTGTCTGGTCTATTTCTCCCGCTCTATTTTGTGTCAAGTGGATTGAAGACTAATATAGCCACCATCAAGGGGCTGCAATCATGGGGTCTTCTGGTTTTTGTTATCTTTACAGCTTCTTTTGGCAAGATTATTGGGACTCTGGCTGTTTCTCTTTTCTGTAAAGTACCTTTTAATGAGGCTTTGGTGTTGGGGTTCTTGATGAATTGTAAAGGTTTGGTTGAATTAATAGTCCTCAACATCGGTAAAGATAGAAAGGTTTTGAATGATCAGACCTTCGCTATTATGGTTCTGATGGCTGTCTTTACTACCTTCATCACCACTCCCCTTGTGACTGCTGTGTATAAGCCTGCAAGGAAGGGAAGACTATCTGATTACAAATATAGAACTATTGCAAGGAAAAATGCTAATAGCCAACTGAGGGTTTTTGCCTGCTTCCATGGTTCAAGAAATATTCCATCAATGATAAATTTGATTGAGGCTACAAGAGGAATCCAGAAGCGTGATGCACTTTGTGTGTATGCAATGCACCTTAAAGAATTTTCTGAGAGGTCCTCATCCATATTAATGGTACATAAGGCCAGAAGAAATGGGTTACCATTCTGGAATAAAGGCCGGCATGCAGATTCCAACCATGTCATTGTGGCATTTGAGGCTTACAGGCAACTAAGCCAAGTGTCTATCCGGCCAATGATCGCAATCTCATCCATGACTAACATACACGAAGACATTTGTGCAACTGCTGAGAGGAAGCATGCCGCAGTCATTATTCTCCCATTTCATAAGCATCAAAGCTTGGATGGTTCACTAAATGTTACTAGAAATGATTTTCGCTGGGTTAACAAAAGGGTACTCGAGCATGCACCGTGCTCAGTTGGAATTTTTGTTGATCGTGGTCTTGGTGGTACAGCCCATGTCTCTGCAAGTAATGTTTCTTATCGTGTTACAGTGCTTTTCTTTGGTGGTGGTGATGACCGTGAAGCCCTTGCTTATGGAGGTCGTATGGCAGAGCACCCTGGCATTAGATTGGTTGTTATCCGCTTTATAGCGGAACCAATAAAGGAAGGAGAGATTCTAAGAGTTGATGTGGGTGACTCCTCTAGCACCAAATTAATCTCACAGGATGAGGAATTCCTCGATGATTTTAAGGTGAAAATAGCCAATGATGACTCCATCATTTATGAAGAGAGAATAGTAAAAAATGCTGCAGAAACAGTTGCTATTATCCGTGAGTTTAATAGCTGCAATCTGTTTATTGTGGGTTCAAGGCCAGCTGGTGAAGTTGCCTGTGCTCTGAAGAGCAATGAACTCCCTGAGCTAGGACCTGTTGGTGATTTGTTAGTATCACAGGATTACCCAACAACAGCATCCGTTTTGGTGATGCAACAGTATCACAATGGGGCATCAACTAATTTTAGCCCAGAAGTGGAGGAACACTTACCTGATGACTCAGAATCTGCTTCTTAA 2397 0.4305 MASNACPPPMKATSNGAFQGDNPLDFALPLLILQICLVLVVSRGLAYILQPLRQPRVIAEIIGGIILGPSALGRNKSYMNAVFPPRSLTVLDTLANIGLIFFLFLAGLEIDPKSIRQTGKRVLAIALAGISLPFVIGIGSSYVLKQTIAKGSDSIAFLVFMGVALSITAFPVLARILAELKLLTTNVGRTAMSAAAINDIAAWILLALAVALSGHDRSPIVSLWVFLAGCGFVICAILIVPPTFKWMSQRCHEGEPVEEVYICATLAAVLAAGFVTDAIGIHAMFGAFVVGILVPKDGPFAGALVEKVEDLVSGLFLPLYFVSSGLKTNIATIKGLQSWGLLVFVIFTASFGKIIGTLAVSLFCKVPFNEALVLGFLMNCKGLVELIVLNIGKDRKVLNDQTFAIMVLMAVFTTFITTPLVTAVYKPARKGRLSDYKYRTIARKNANSQLRVFACFHGSRNIPSMINLIEATRGIQKRDALCVYAMHLKEFSERSSSILMVHKARRNGLPFWNKGRHADSNHVIVAFEAYRQLSQVSIRPMIAISSMTNIHEDICATAERKHAAVIILPFHKHQSLDGSLNVTRNDFRWVNKRVLEHAPCSVGIFVDRGLGGTAHVSASNVSYRVTVLFFGGGDDREALAYGGRMAEHPGIRLVVIRFIAEPIKEGEILRVDVGDSSSTKLISQDEEFLDDFKVKIANDDSIIYEERIVKNAAETVAIIREFNSCNLFIVGSRPAGEVACALKSNELPELGPVGDLLVSQDYPTTASVLVMQQYHNGASTNFSPEVEEHLPDDSESAS 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01832 798 Gene3D - 490 755 - -
Cca06g01832 798 PANTHER CATION/H + ANTIPORTER 4 788 - -
Cca06g01832 798 Pfam Sodium/hydrogen exchanger family 37 422 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Cca06g01832 798 PANTHER CATION/H(+) ANTIPORTER 18 4 788 - -
Cca06g01832 798 MobiDBLite consensus disorder prediction 779 798 - -
Cca06g01832 798 Gene3D - 30 433 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01832 Cca-Chr6 33717695 33721836 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01832 1 786 Antiporter Super Family AT5G41610 68.381 0.0 1086
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01832 - - gmx:100810155 1377.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01832 06 33717695 33721836 Cca06g01832 06 33717695 33721836 ECH