Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01830 ATGGACGGGAGGTTCCAGAACTTGACTTTCACAGCTAACCCTTCAGCAAATGCATTCAAGATTTTGGGTAACTCAATGCAAGTTGAAGGAAGGGGAGCTGATTGTTGTACAGATACCATCTTACAACATGATTCCCGTGCTTTTTCAATCTCAAAGGGAACAAAAAGAAAGTGGGATTTAATTGATGGATCTATGGGTCAGAGCATTGGCTCTTCTTTCTCTCATGGGCTTGAACTTTCAACAAGTTCCTCAGACAGCAAGGAGAGTTCAGCTACTGCTTGCACTGCTATGTCTTCAGCCAAAGAGATTGACGAGGAATCATCTTTGGATATTGAACTGGACTTTACACTTCATCTTGGCTGTGAGAAGGTACAAAGCCCGAAAAACCCTGCTAGTTCAAATTTGAAGATATTCGAATTGCAGCCCAAGGTTGATTTGAAGTTGTGCCTTTCCACCCAGCCCTCTGACTCAGATATTACTAGTGTTTGTCTAAGTCCCTCTCAGGCCCCACCACTTCAGTTGAACACGGAGATCCCATTAGTATTCAGTAGGACAACAAATGCTGATGAGGGATCAACTTCATGTTTTTGGAAACCAGGGCTTGTTTCACTTAATACAGGTGCTAGTCTAATGTTGAACCAGGCTGCAAAAAAGTTTGAACATAATATTGGGCTCGATCTCTTGTCAACCAGACCAAGAAGTTCGGTAACCTGTACCTCTGGGCTAACACAACAAAAACAACCACTACGTTGCAACAGTAATTCTAAGACATGTCAAGTTGAGGGATGTGGAAAGGGTGCCAGAGGTGCTTCTGGACATTGCATATCTCATGGTGGTGGTAGGAGGTGTCAGAAACCTGGCTGCAATAAAGGAGCTGTAGGCCGGGCTGTGTACTGCAAATCTCATGGAGGTGGCAGGCAATGTGAATATCATGGTTGCACTAAGAGTGCAGAAGGACGTACAGATTTCTGTATTGCTCATGGTGGTGGTCAGAGATGCAGTCGTGAGGGTTGTCTCCGAGCTGCCAGAGGGAAATTTGGATTGTGTATTCGGCATGGTGGTGGCAAGAGATGTCAAAGAGAAAATTGTACTAAGAGCGTGGAAGGCTTATCAGGTCTGTGCATCTCACATGGGGGAGGGCATCAATGTCAAGCTTCTGGATGCACCGAAGTGGGACAGGAGACCACTATGTTCTGCAAAGCACATGGTGGTGGGAAACACTGTATAGTACCAGGGTGCATCAAAGGTGCTGAGGGGACCATGCCATTTTGCGAAGGCCATGGTGGAGGTAAATGCTGTGCATACCAGGGTGGTGGAATCTGTACTAAAAGTGTGCATGGAGGTACCAACTTCTGTGTGGCACATGGGGCTGGAATGAGGTGTGCTGTACCTGACTGCATTAAGGGTGCCAGAGGACAGACTGATTATTGTGTATGTCATGGGGGAGGCAAGAGATGCAAGTTTGAAGGGTGTGGAAAGAGTGCACAAGGTGGCACTGACTTTTGCAAGGCACATGGGGGAGGGAAGAGATGCTGTTGGGGCCATCCTGGGTCAGAATATAGCACTAAACATGGTGGCCCTTGTAATTCATTTGCAAGAGGGGAGACAGGCCTGTGCGCACTCCATAGTGGGTTAGTGCTGGATAAGAGAGTTCACGGAGGTGTATCCTTGGAACCAGTTATTCAGGATACTCGTGTTAATAAACTGGATGAATTGAAGCAGATGGTCATTAACCAAGATATGGATGTGGATACGATGAAAATGCATAGCCCAAGGAAAGCTGGTTTGATAGCATGTTCTGATGTTAAACTCAATGAAGTTGCAAGTACTCGTCTCCCAGTTGGGGAAGATGGTCACACACCAATGTCAGTTGCGGTTCCTGAAGGCAGGGTGCATGGTGGAATTCTGATGGCAAAGCTGATGGAGAGTTCTGATCTTGGTACTAACAGTGGGAGAGGTCTATTAAGTGATCCATCAGAGACAATTAAAGCTTGCATCGTGTCCAAGAGCAAAATTTGA 2019 0.4626 MDGRFQNLTFTANPSANAFKILGNSMQVEGRGADCCTDTILQHDSRAFSISKGTKRKWDLIDGSMGQSIGSSFSHGLELSTSSSDSKESSATACTAMSSAKEIDEESSLDIELDFTLHLGCEKVQSPKNPASSNLKIFELQPKVDLKLCLSTQPSDSDITSVCLSPSQAPPLQLNTEIPLVFSRTTNADEGSTSCFWKPGLVSLNTGASLMLNQAAKKFEHNIGLDLLSTRPRSSVTCTSGLTQQKQPLRCNSNSKTCQVEGCGKGARGASGHCISHGGGRRCQKPGCNKGAVGRAVYCKSHGGGRQCEYHGCTKSAEGRTDFCIAHGGGQRCSREGCLRAARGKFGLCIRHGGGKRCQRENCTKSVEGLSGLCISHGGGHQCQASGCTEVGQETTMFCKAHGGGKHCIVPGCIKGAEGTMPFCEGHGGGKCCAYQGGGICTKSVHGGTNFCVAHGAGMRCAVPDCIKGARGQTDYCVCHGGGKRCKFEGCGKSAQGGTDFCKAHGGGKRCCWGHPGSEYSTKHGGPCNSFARGETGLCALHSGLVLDKRVHGGVSLEPVIQDTRVNKLDELKQMVINQDMDVDTMKMHSPRKAGLIACSDVKLNEVASTRLPVGEDGHTPMSVAVPEGRVHGGILMAKLMESSDLGTNSGRGLLSDPSETIKACIVSKSKI 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01830 672 PANTHER F22C12.10 1 649 - -
Cca06g01830 672 PANTHER EMB|CAB89363.1 1 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01830 Cca-Chr6 33704692 33709033 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01830 383 544 WRKY Transcription Factor Family AT4G12020 48.765 1.83e-39 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01830 - - gmx:100809074 1072.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01830 06 33704692 33709033 Cca06g01830 06 33704692 33709033 ECH
Cca06g01830 06 33704692 33709033 Cca09g02480 09 50313935 50318779 PCT