Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01814 ATGGGTAGCAAAGAGCAAGAGAGTATTAAGAGGGTTATGACTCACGGTGGTCGATACATTGAATACAATGTGTACGGAAACTTGTTCCAGGTCTCGACCAAGTATGTCCCTCCCATTCGCCCTATCGGTAGAGGCGCATACGGCATCGTTTGCGCTGCCGTTAACTCCGATACGCACGAGGAAGTTGCCATAAAAAAGATCGGTAACGCCTTCGACAACATCATTGACGCTAAACGGACTTTGAGGGAAATCAAGCTCCTTCGCCACATGGACCATGAAAATATTATTGCTATTAAGGATATCATTCGGCCTCCCAGCCAGGACGCCTTCAATGATGTTTACATTGTTTATGAATTGATGGACACTGATCTTCATCAGGTTATTCGTTCTGATCAGCCTCTTAACCATGACCATTGTCAGTACTTTTTATATCAGCTGCTACGGGGCCTGAAATATGTGCATTCTGCTAATGTCTTGCACCGGGATCTTAAGCCAAGTAATTTGCTTCTGAATGCCAACTGTGACCTTAAAATTGGGGACTTTGGTTTGGCTAGGACAACATCTGAAACGGATTTTATGACGGAGTATGTTGTCACTCGATGGTACCGAGCCCCAGAATTGCTCCTTAATTGTTCAGAGTACACCTCTGCGATTGATGTTTGGTCTGTTGGTTGCATATTTTGTGAAATTATGACTAGAGAACCCTTGTTTCCTGGGAAAGATTACGTTCATCAACTAAGGCTTATAACAGAGTTAATAGGTTCACCTGATGATGCCAGCCTTGGATTTCTCCGAAGTGAAAATGCCAAAAGGTATGTTCGACAGCTTCCATCATATAGGAAGCAAAATTTCTCGGCTAGATTCCCAAATATGTCTCCTGAGGCATTGGATTTACTAGAAAAGATGCTTATCTTTGATCCCAGCAAACGCATTACAGTTGATGAAGCACTATGTCATCCATATCTTTCATCACTTCATGACATCAATGATGAACCAGTTGGCCCTGGGCAATTCAATTTTGATTTTGAGCAGCCAACATGCACTGAAGAGCACATCAAGGAGCTCATCTGGAGGGAATCGGTGAAGTACAATCCAGATCCACCCTCTCAGTAA 1113 0.4331 MGSKEQESIKRVMTHGGRYIEYNVYGNLFQVSTKYVPPIRPIGRGAYGIVCAAVNSDTHEEVAIKKIGNAFDNIIDAKRTLREIKLLRHMDHENIIAIKDIIRPPSQDAFNDVYIVYELMDTDLHQVIRSDQPLNHDHCQYFLYQLLRGLKYVHSANVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFCEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSENAKRYVRQLPSYRKQNFSARFPNMSPEALDLLEKMLIFDPSKRITVDEALCHPYLSSLHDINDEPVGPGQFNFDFEQPTCTEEHIKELIWRESVKYNPDPPSQ 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01814 370 Pfam Protein kinase domain 40 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g01814 370 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Cca06g01814 370 Gene3D Transferase(Phosphotransferase) domain 1 120 349 - -
Cca06g01814 370 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 369 - -
Cca06g01814 370 SUPERFAMILY Protein kinase-like (PK-like) 39 330 IPR011009 -
Cca06g01814 370 ProSitePatterns Protein kinases ATP-binding region signature. 42 66 IPR017441 GO:0005524
Cca06g01814 370 ProSitePatterns MAP kinase signature. 71 174 IPR003527 GO:0004707|GO:0005524|GO:0006468
Cca06g01814 370 ProSiteProfiles Protein kinase domain profile. 36 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g01814 370 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 14 369 - -
Cca06g01814 370 SMART serkin_6 36 322 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g01814 370 CDD STKc_TEY_MAPK 29 365 - -
Cca06g01814 370 Gene3D Phosphorylase Kinase; domain 1 19 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01814 Cca-Chr6 33553074 33556329 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01814 3 365 MAP Kinase Gene Family AT4G01370 83.471 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Cca06g01814 Pkinase 4.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01814 - - gmx:100803024 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01814 06 33553074 33556329 Cca06g01814 06 33553074 33556329 ECH
Cca06g01814 06 33553074 33556329 Cca09g02459 09 50065418 50068822 PCT