Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01775 ATGGCAATGGTAACAAAAACTCCTCTTTATGAGGATGGTGAGCTTGTTGGTGTTATAACTGTTTCAAGTGATTCAGCTATTTTAAACTCTAGAAATTCAGAAAATCAAAGGACTTACCAATCTGGTAACAATGGCCTACCTGGAGTACAGAGGTTAAACTTCAAAAGGATTCAGTGGCCTCCACGACCAACGATTGCACCAATGCCACAGATTGCTTCATGTGTTTCCAATCTGGCATCAAAGTTTCTCCCAGCGCATACTGATAACACAGTTTCCAGGAATACTTCAACAGATGTAGAAGATGAAAAACTAGAGAAGCGTAACATACATGAAACAAAACCTCATTCCAGACATCACCATAAAGAAAACACAACTTTCACAGAGGCCTCAGAGAAGGATGAGTCTACTACTGAATTTGGTCAACCTTCTAAAATTGCAGCCAGAGTCCTTGCCAAGCTTCAAATTGGGGCACGTGCAAAATGTGAGAAGGATAATGGAAGTATCAAGAATAATTGTACAGCTGATAATTCAGGAAGCAATAGAGTGAATAATGAAAATGATTCATCTGGAGGTTTAGTGTCATTCACACCATATCAGGATGTTGCTAATGGAGCAGATAAAGAAGAAAATCTTCATAAATGTAATTCTTTATTTGCAATGAAGAGAGCAGATACAAAAGTTTGCTCATACAGAGCATCCAATGTTTTCAAAGATAGTTCTGGTAAAACTTTGTCAGGGGAGTGGTGTGAATGTTTTGGTTCTCCCATTCCCCAAGATCCATTGTTAAGATTACGCTGTCAATTTGATCAGAAGAAATTGGAGCCAGAGGCTACAAATATGGTGGCAGGAGATGAAGTGCAAAAGCAGCAAGAAGGGTCGCAATTGCCAAGTTCGAGGGAGAGTAACGGCAGCCATGAAAGTTCATCAAGCAAAGGGGATAACGAGTCAAACTCTGTTTTGGAGTGTGAAATCCATTGGGAAGACCTTCAATTAAGGGAGGAGATTGGACAAGGTTCTTATGCTGCTGTTTATCATGGAATTTGGAATGGATCGGATGTAGCAGTCAAAGTTTATTTTGGGAACGGATACACAGAAAATACTTTACAAGACTACAGAAAAGAGATTGATATAATGAAGAGATTGAGACACCCTAATGTATTGCTTTTCATGGGAGCAGTATATTCACAGGAAAGGCTTGCCATTGTGACAGAGTTATTACCTAGGGGAAGCCTTTTTAAAAACCTGCACAGTAACAATCAGACATTAGACATCAGAAGGCGTCTAAGGATGGCTCTTGATGTTGCTAGAGGAATGAATTATCTTCATCACAGAAATCCACCAATAGTGCATAGAGACCTGAAGTCTTCCAACCTTCTTGTAGATAAAAACTGGACTGTAAAGGTCGGAGACTTTGGCCTGTCTAGGTTAAAGGATGCAACTTTATTGACTACAAAATCTGGGAGAGGCACCCCTCAGTGGATGTCCCCTGAAGTCCTCAGAAATGAACCTTCAAATGAGAAGTCTGATGTGTTCAGTTTTGGTGTCATCCTCTGGGAACTAATGACTCAGTCTATCCCATGGAAAAACTTGAATTCCTTGCAGGTTGTTGGAGTCGTAGGCTTTATGGATAGACGACTAGACATCCCGGAGGGGCTTGATCCCCATATTGCATCGATCATAAATGACTGCTGGCGAAGTGATCCAGAGCAACGCCCATCTTTTGAAGAGCTGATACAGAGAATGATGTTCCTTGTCAACAGAGTAACAGCAGTGTCAATTAAAAGAATTTCAGAATCTTAA 1800 0.4056 MAMVTKTPLYEDGELVGVITVSSDSAILNSRNSENQRTYQSGNNGLPGVQRLNFKRIQWPPRPTIAPMPQIASCVSNLASKFLPAHTDNTVSRNTSTDVEDEKLEKRNIHETKPHSRHHHKENTTFTEASEKDESTTEFGQPSKIAARVLAKLQIGARAKCEKDNGSIKNNCTADNSGSNRVNNENDSSGGLVSFTPYQDVANGADKEENLHKCNSLFAMKRADTKVCSYRASNVFKDSSGKTLSGEWCECFGSPIPQDPLLRLRCQFDQKKLEPEATNMVAGDEVQKQQEGSQLPSSRESNGSHESSSSKGDNESNSVLECEIHWEDLQLREEIGQGSYAAVYHGIWNGSDVAVKVYFGNGYTENTLQDYRKEIDIMKRLRHPNVLLFMGAVYSQERLAIVTELLPRGSLFKNLHSNNQTLDIRRRLRMALDVARGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKDATLLTTKSGRGTPQWMSPEVLRNEPSNEKSDVFSFGVILWELMTQSIPWKNLNSLQVVGVVGFMDRRLDIPEGLDPHIASIINDCWRSDPEQRPSFEELIQRMMFLVNRVTAVSIKRISES 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01775 599 MobiDBLite consensus disorder prediction 121 138 - -
Cca06g01775 599 SUPERFAMILY Protein kinase-like (PK-like) 317 588 IPR011009 -
Cca06g01775 599 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 53-RELATED 1 585 - -
Cca06g01775 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Cca06g01775 599 PRINTS Tyrosine kinase catalytic domain signature 552 574 IPR001245 GO:0004672|GO:0006468
Cca06g01775 599 PRINTS Tyrosine kinase catalytic domain signature 442 460 IPR001245 GO:0004672|GO:0006468
Cca06g01775 599 PRINTS Tyrosine kinase catalytic domain signature 508 530 IPR001245 GO:0004672|GO:0006468
Cca06g01775 599 PRINTS Tyrosine kinase catalytic domain signature 403 416 IPR001245 GO:0004672|GO:0006468
Cca06g01775 599 PRINTS Tyrosine kinase catalytic domain signature 489 499 IPR001245 GO:0004672|GO:0006468
Cca06g01775 599 PANTHER SERINE-THREONINE PROTEIN KINASE 1 585 - -
Cca06g01775 599 MobiDBLite consensus disorder prediction 283 317 - -
Cca06g01775 599 ProSiteProfiles Protein kinase domain profile. 329 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g01775 599 MobiDBLite consensus disorder prediction 95 111 - -
Cca06g01775 599 MobiDBLite consensus disorder prediction 88 140 - -
Cca06g01775 599 SMART serkin_6 329 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g01775 599 ProSitePatterns Protein kinases ATP-binding region signature. 335 356 IPR017441 GO:0005524
Cca06g01775 599 CDD STKc_MAP3K-like 335 581 - -
Cca06g01775 599 Gene3D Transferase(Phosphotransferase) domain 1 408 592 - -
Cca06g01775 599 Gene3D Phosphorylase Kinase; domain 1 322 406 - -
Cca06g01775 599 MobiDBLite consensus disorder prediction 279 317 - -
Cca06g01775 599 Pfam Protein tyrosine and serine/threonine kinase 329 580 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01775 Cca-Chr6 33070876 33077938 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01775 1 587 MAP Kinase Kinase Kinase AT4G23050 46.612 3.60e-162 479
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Cca06g01775 PK_Tyr_Ser-Thr 7e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01775 - - gmx:100813707 1063.91