Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01767 ATGGCCCCATCAGCATCCTCCAAGAGGCACCCACTGTATCACGGAATCCGTTGTCGCGGAACCAAATGGGTCTCCCGCATATGGCTCGGCACCTTCCCCACGCCAGAGATGGCGGCCGCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGAGGGCGGCCGCCGCCTACGACGTGGCCTCCTTGGCCCTGAAAGGCGACGGTGCTGTCCTCAACCTCCCTCACTCCGTGGACAAGTATCAAATCCCCGCAACAAACTCTCCTGCGGACATCCGCAGTGCCGCCTCCGCTGCAGCCGCAATGATAAAGGCTGAAACTGAAGCTAACCGCAATCACATTAATTCATCAGTAAGTGAAGCTAGCCAGTGCAGTGCATCAACTTGTTCGTGGCTTCAAAGTGATTTCGTGGACGAGGAAGCCATTTTCAGCATGCCCAGTTTGCTGGTGGGCATGGCCGGGGGAATGCTTCTGTCGCCGCCCAGAATATCATTTACCTCTCAGGAGAACCAACGTGGAGAAACTTTGTGGAGTTACTTTTGA 699 0.4134 MAPSASSKRHPLYHGIRCRGTKWVSRIWLGTFPTPEMAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERAAAAYDVASLALKGDGAVLNLPHSVDKYQIPATNSPADIRSAASAAAAMIKAETEANRNHINSSVSEASQCSASTCSWLQSDFVDEEAIFSMPSLLVGMAGGMLLSPPRISFTSQENQRGETLWSYF 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01767 232 Coils Coil 104 106 - -
Cca06g01767 232 ProSiteProfiles AP2/ERF domain profile. 12 127 IPR001471 GO:0003700|GO:0006355
Cca06g01767 232 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 103 232 - -
Cca06g01767 232 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 2 42 - -
Cca06g01767 232 PANTHER ETHYLENE RESPONSE FACTOR 103 232 - -
Cca06g01767 232 PANTHER ETHYLENE RESPONSE FACTOR 2 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01767 Cca-Chr6 32995081 32995779 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01767 7 37 AP2-EREBP Transcription Factor Family AT5G52020 50.000 1.56e-06 45.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01767 - - gmx:100811020 159.073
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca11g01699 11 41362650 41364314 Cca06g01767 06 32995081 32995779 PCT