Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01746 ATGGAGAAAGGCAAAGCGATGGAGCTTGCTTTGCTCCTTGCCCTAACTCTCATGCTTAGCGTCAGCCCAACAACTTCAGTGGCCGAAgagcatggcaacaacaacaacaacttactcacttacattgttcacgtcaaaaagcccgagggcgcagtttttcttcaatcacaagagttacacgactggtaccactcgttccttccaacaccctcccacaaggaacgagtgcttttctcttaccgcaacgtggcttctggatttgccgtgaagctaaccccagaagaggccaaagctcttcaagacaaggaggagattgtgtcagctcgtcccgaaagaaccctttctctgcacacaacacacactccttcattccttggtcttcgacaaggagtaggattgtggaatagctccaaccttggaaaaggtgtcatcattggagttatagacacagGTATATACCCCTTCcatccatcattcaacgatgaagggatgccacctcctccagcgaagtggaaaggacactgcgaattcacaggggaaagaacatgcaacaacaaactcatcggtgcgaggaatttactcaaaagcgccaatgaagagcctccatttgaaaacttcttccatggaacccacactgctgcagaagccgcaggaagatttgtagcgaacgctagcgttttcggcaacgctctgggtactgcggctggcatggcacccgatgcacacgtagcAATGTACAAAGTGTGCAACGACAAAGTTGGATGCACTGAAAGTGCCATCTTGGCCGCAATGGACATAGCCATTGACGATGGCGTCGATGTTCTTTCTCTCTCCCTTGGTTTAGGCTCTCTCCCGTTCTCCGAAGACCCTATCGCGATTGGCGCGTTCGCTGCCGTTCAGAACGGAGTTTTCGTTAGTTGCTCAGCCGCGAATGCTGGCCCTGACTACAGCACTCTTTCAAACGAAGCACCATGGATCCTCACCGTCGGTGCAAGCACCATTGACAGAAAAATAGTAGCGTCAGCAGTGCTTGGAAACGGTTTAGAATTCGAAGGGGAATCTTTGAACCAACCCAAAGACTTTTCACAAAGTTTGTTGCCACTTGTGTATGCAGGTCAAAACGGAAACAAATCTTCTGCCTTTTGTGCACCAAGATCCTTAAAGAACATTGATGTGAAGGGAAAAGTGGTGGTGTGCGACATAGGTGGAAACATTCCAAGTGTCAGCAAAGCAGAAGAAGTTTTCAACGCTGGTGGTGCAGCCATAATCCTCGCCAACCCTCAATCCTTTGGCTTCAGCACTTTCGCTACTGCTTATGTTTTACCGGCGGTGGAGGTTAGTTACACTGCAGGGCTAGCCATAAAAGCTTACATAAACTCAACCTACTCACCAACCGCAACAATCAAATTCAAAGGAACCGTGATTGGTGATCCACTTGCTCCAGCAGTTGTTTTCTTTTCTTCAAGAGGGCCAAGCCAGGAGAGTCCCGGGATTCTGAAACCCGACATCATTGGACCCGGAGTGAACATCCTAGCTGCATGGGCCCTGTCCGTAGACAACAAAATCCCAGCGTATAACATTGTTTCGGGAACCTCAATGTCTTGTCCACACCTTAGTGGCATTGCTGCATTGCTCAAGAGTGCACACCCTGATTGGTCCCCCGCGGCTATAAAGTCAGCGATCATGACCACTGCCTACACGGTCAACCTTGGAGGTCAACCCATATTGGACCAAAGGCTTCAAATTGCTGACATTTTTGCAACTGGTGCAGGCCATGTTAACCCTAATAAGGCAAATGATCCAGGGCTTGTCTATGACATTCAGCCAGATGATTACATTCCTTATTTGTGTGGTTTGGGTTATGGGGACAGAGAAATTGGAATTCTTGTGCAGAGGAGAGTGAGGTGCTCCGATGTACATGCCATACCGGAAGCGCAACTCAATTACCCTTCGTTTTCTATTCTGTTGGGGTCTACTTCACAGTACTACACCAGAACGTTGACCAATGTTGGACCTGCTGAGTCAACTTACGTCGTGGATCTTGATGTGCCTTTGGCCTTGGGTATGAGCGTGAACCCTAGTCAGATAACATTCACTGAGGTGAACCAGAAGGTTACATTCTCTGTGGAGTTTATCCCACAGATAAAGGAAAATAGAGGCAACAATAGCTTCGCTCAGGGTTCTCTCACCTGGGTTAGGGTGTCTGACAAACACGCTGTTAGGATCCCCATATCTGTTATTTTCAAGTGA 2250 0.3436 MEKGKAMELALLLALTLMLSVSPTTSVAEEHGNNNNNLLTYIVHVKKPEGAVFLQSQELHDWYHSFLPTPSHKERVLFSYRNVASGFAVKLTPEEAKALQDKEEIVSARPERTLSLHTTHTPSFLGLRQGVGLWNSSNLGKGVIIGVIDTGIYPFHPSFNDEGMPPPPAKWKGHCEFTGERTCNNKLIGARNLLKSANEEPPFENFFHGTHTAAEAAGRFVANASVFGNALGTAAGMAPDAHVAMYKVCNDKVGCTESAILAAMDIAIDDGVDVLSLSLGLGSLPFSEDPIAIGAFAAVQNGVFVSCSAANAGPDYSTLSNEAPWILTVGASTIDRKIVASAVLGNGLEFEGESLNQPKDFSQSLLPLVYAGQNGNKSSAFCAPRSLKNIDVKGKVVVCDIGGNIPSVSKAEEVFNAGGAAIILANPQSFGFSTFATAYVLPAVEVSYTAGLAIKAYINSTYSPTATIKFKGTVIGDPLAPAVVFFSSRGPSQESPGILKPDIIGPGVNILAAWALSVDNKIPAYNIVSGTSMSCPHLSGIAALLKSAHPDWSPAAIKSAIMTTAYTVNLGGQPILDQRLQIADIFATGAGHVNPNKANDPGLVYDIQPDDYIPYLCGLGYGDREIGILVQRRVRCSDVHAIPEAQLNYPSFSILLGSTSQYYTRTLTNVGPAESTYVVDLDVPLALGMSVNPSQITFTEVNQKVTFSVEFIPQIKENRGNNSFAQGSLTWVRVSDKHAVRIPISVIFK 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01746 749 Pfam Peptidase inhibitor I9 40 117 IPR010259 -
Cca06g01746 749 PRINTS Subtilisin serine protease family (S8) signature 140 159 IPR015500 -
Cca06g01746 749 PRINTS Subtilisin serine protease family (S8) signature 204 217 IPR015500 -
Cca06g01746 749 PRINTS Subtilisin serine protease family (S8) signature 529 545 IPR015500 -
Cca06g01746 749 Gene3D - 335 475 - -
Cca06g01746 749 Pfam PA domain 367 454 IPR003137 -
Cca06g01746 749 CDD PA_subtilisin_like 343 468 - -
Cca06g01746 749 Pfam Subtilase family 140 574 IPR000209 GO:0006508|GO:0008236
Cca06g01746 749 Gene3D Peptidase S8/S53 domain 142 612 IPR036852 GO:0004252|GO:0006508
Cca06g01746 749 Pfam Fibronectin type-III domain 646 746 IPR041469 -
Cca06g01746 749 ProSiteProfiles Serine proteases, subtilase domain profile. 124 599 - -
Cca06g01746 749 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 145 156 IPR023827 -
Cca06g01746 749 CDD Peptidases_S8_3 116 566 IPR034197 -
Cca06g01746 749 PANTHER SUBTILISIN-LIKE SERINE PROTEASE 25 748 - -
Cca06g01746 749 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 117 IPR037045 -
Cca06g01746 749 Gene3D - 616 748 - -
Cca06g01746 749 SUPERFAMILY Subtilisin-like 116 603 IPR036852 GO:0004252|GO:0006508
Cca06g01746 749 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 748 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01746 Cca-Chr6 32754995 32757734 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01746 11 749 Subtilisin-like Serine Gene Family AT1G04110 43.112 0.0 566
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01746 - - gmx:100783595 1253.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01746 06 32754995 32757734 Cca06g01746 06 32754995 32757734 ECH