Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01714 ATGCAAGTATTTAAGTACACGGTTGTGCTTCCTCTGTGTCAGATACGAAGATATATGTACAACGATGTTATACGGCTTGACGATGCTCAAACATTGTTGAATTGTTCCCTTGTTCAACCCTACACAACAAACAAAACTAAGGTTGTGTTTTTGAAACAAAGGGCACCCACCCGCTCCCACAAAGGCTCTAGCAACCTTTGCATCACGTGTGACCGTAACCTTCAAGATCCATACACCTTCTGCTCTTTGTCTTGCAAGGTTCATCGATATCTTCTACTAATTACCAAAAACACAACCACAAAGGACCCTTGGAACAAGCATGAATTCTCTGTTGTACTAGACAACGAAAGAAGTAGCGAGAAGCCACAAGAGATTGAAGATAGCCAAATCACAACAGATTCAGTTCTAGACTCATCCACGTCGACGTCGTTTTGCACTGTGTCTGGGTCAACAAGTAGTAATAGTGGGGTTGTGGCAGAGAGCGTGAATAAGTTACTTAAAAAGAAACGTAGCAGTGTTGAGATGGTGCCAGAGATTTGGTACACCATGGTGAACCGGCGAAAAGGTGTCCCCCATCGATCTCCATTGTACTGA 594 0.4343 MQVFKYTVVLPLCQIRRYMYNDVIRLDDAQTLLNCSLVQPYTTNKTKVVFLKQRAPTRSHKGSSNLCITCDRNLQDPYTFCSLSCKVHRYLLLITKNTTTKDPWNKHEFSVVLDNERSSEKPQEIEDSQITTDSVLDSSTSTSFCTVSGSTSSNSGVVAESVNKLLKKKRSSVEMVPEIWYTMVNRRKGVPHRSPLY 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01714 197 MobiDBLite consensus disorder prediction 115 134 - -
Cca06g01714 197 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 13 197 - -
Cca06g01714 197 PANTHER BNAA09G38660D PROTEIN 13 197 - -
Cca06g01714 197 Pfam PLATZ transcription factor 16 87 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01714 Cca-Chr6 32459555 32460562 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Cca06g01714 PLATZ 8.8e-25 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01714 - - ccaj:109801146 345.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01714 06 32459555 32460562 Cca06g01714 06 32459555 32460562 ECH