Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01711 ATGTCGGCTTACAAAGACCAGGATCCTCGTCTTCATGGTATCAAAACTAAGATTCGTGTCGTCCCCGATTTTCCCAAATCCGGTATTATGTTCCAAGACATAACTACTTTGTTGCTCGACCCCAAAGCATTTAAGGACACAATCGATTTGTTCGTTGAGCGATACAAGGGCAAAAACATTTCTGTTGTTGCAGGAATCGAAGCCCGAGGTTTTATTTTTGGTCCTCCCATTGCACTGGCTATAGGAGCAAAGTTTGTACCATTGAGGAAACCAAAGAAGTTGCCTGGAAAAGTTATTTCTCAAGAATATATTCTGGAATATGGAAGGGACTGTCTTGAGATGCATGTTGGAGCAGTTGAACCTGGTGAGCGTGCTTTAGTGGTTGATGATTTGATTGCAACTGGTGGAACCCTCTGTGCAGCTATGGATTTGCTAGAACGTGTGGGAGCAGAAGTAGTGGAGTGTGCATGTGTAATTGAATTACCAGAATTGAAGGTATGTATACTTTGGATTTTGTGA 519 0.4239 MSAYKDQDPRLHGIKTKIRVVPDFPKSGIMFQDITTLLLDPKAFKDTIDLFVERYKGKNISVVAGIEARGFIFGPPIALAIGAKFVPLRKPKKLPGKVISQEYILEYGRDCLEMHVGAVEPGERALVVDDLIATGGTLCAAMDLLERVGAEVVECACVIELPELKVCILWIL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01711 172 Hamap Adenine phosphoribosyltransferase [apt]. 14 172 IPR005764 GO:0003999|GO:0005737|GO:0006168
Cca06g01711 172 Gene3D - 2 167 IPR029057 -
Cca06g01711 172 Pfam Phosphoribosyl transferase domain 50 162 IPR000836 -
Cca06g01711 172 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 3-RELATED 2 166 - -
Cca06g01711 172 SUPERFAMILY PRTase-like 12 164 IPR029057 -
Cca06g01711 172 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 2 166 - -
Cca06g01711 172 CDD PRTases_typeI 48 165 IPR000836 -
Cca06g01711 172 TIGRFAM apt: adenine phosphoribosyltransferase 14 165 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01711 Cca-Chr6 32416090 32420956 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01711 1 165 PRT Gene Family AT1G27450 78.788 3.40e-93 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01711 K00759 - gmx:100306411 325.479