Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01699 ATGGAGGAACCGAACGAAGCGCAAGACAACAGAGAACTCTACGCGCTCCTGAACCTGTCTCCAGAAGCTTCCGATGAAGAAATTCGCAGAGCGTATCGTCAATGGGCACAAGCCTATCACCCCGATAAATACCAAGCTCCTCACATGAAGGATATTGCTACGGAGAACTTTCAGCGAATATGTGAAGCTTATGAGATTCTTTCGGATCCAAATAAGAGGCAAATATATGATATCTACGGCATGGAAGGGTTGACCTCTGGTTTGGAACTTGGTCCGAAGCTGGATGGAGCTGAAGAGATCAAGAGGGAGCTCGAGAGACTGAAGAGGATGAAGGAACAGGAAAAAGTAGCGGCGCATTTTCGATCCTCTGGTACAATTCTGGCCAAGATGTCTTTGCCACACTGTTTAGACGGTGATGGCCTCATGAGAGGAATGGCTATGACTAGTGAAATCCAGTCTCAGTTATCAAAGCGTAATGCTGTAACGATTGGTGGCAATTTAGCGGTGAACGGAAGTGAAGGTGGTGGAGCTGCTACGGCTGTGTTTAGGCATGAACTTTCAGAAGTTTCGACAGTAGAGTTTGTGGCTTCAGCTGGTTTGCGTGCACTAATTGGGGTGCAAACAACTCGCAATCTATCGTCACACTCGGCTGCAACAATGGGAATAGCAATGTCTTTGAGAGATGGTTCATTGAATCTTTCAAATTTATGGACCCGCCAATTGTCAGAAACTGCAAGTGGACATATAGAGCTTACTTTGGGTCCACAATCTTCTATAGCTGTTGGGTGGCAAAAGAAAGATGAGATAAGGTCTGCCTCTGGAGAATTAAAGTTTGGCACAGGTTCTTTTGAGACAGCAGTTCATTATACCCATCGTTTTTCTACTAAATCTCTTGGCTGCATTGTGGGAAGAGTTGGGAGTTCTTCCCTTGAGATTGAAGTTGGTGGTGGGAGGAAGTTATCCAAATTCAGCTCAGTGCGCTGGTTGTATATAATAGGAATTCAGGGTATTTCCTGGAAATTTGAACTCTATCGTGGGGGTCAGAAGTTAATTATTCCTATTTTGCTGACAAGGCATCTGAACCCGGTGTTTGCTACTGGAGCATTTGTTGTTCCTGCATCTCTTTACTTCACTCTAAAGAAACTTTTTTTTAAACCTTATTTTCTTAGAAGGAATAAGCAGAAGGCTCGGGAGGAGGAGGAGAAAACTTCTGCTCAGGTTAAGGAAGCAAGGGCTGCTGCAGAGAAAGCTCAGAAATTACAACAAAATGTGGCTACTAGGAAAAGAAACAAACAATTAGAGTCACGTGGACTGGTTATTATGAGAGCACTATATGGAAATAAGATAATTTTGAACAATTTGAAGTCATCAAGTGAAACAAGTTCCGAATCAACTTCAGAAGTCATTGATGTTACCATACCTCTGAATTTTCTAGTTAATGATTCTGGCCAACTTAAGCTTCATGAAGGTGTAAAAAAATCAGGCATTATGGGTTTCTGTGATCCATGTCCAGGAAGACCTAAAGAGTTGTATGTAGAGTACGTTTATGCTGGCAATCAATACAAGGTTTGGTTTTGCCTGGTTTACATGGTTGAGGTACAACATTTGATCCTGTCAGATGGAGTTGGAAGAGGACATTTTAGGAGATGA 1650 0.4273 MEEPNEAQDNRELYALLNLSPEASDEEIRRAYRQWAQAYHPDKYQAPHMKDIATENFQRICEAYEILSDPNKRQIYDIYGMEGLTSGLELGPKLDGAEEIKRELERLKRMKEQEKVAAHFRSSGTILAKMSLPHCLDGDGLMRGMAMTSEIQSQLSKRNAVTIGGNLAVNGSEGGGAATAVFRHELSEVSTVEFVASAGLRALIGVQTTRNLSSHSAATMGIAMSLRDGSLNLSNLWTRQLSETASGHIELTLGPQSSIAVGWQKKDEIRSASGELKFGTGSFETAVHYTHRFSTKSLGCIVGRVGSSSLEIEVGGGRKLSKFSSVRWLYIIGIQGISWKFELYRGGQKLIIPILLTRHLNPVFATGAFVVPASLYFTLKKLFFKPYFLRRNKQKAREEEEKTSAQVKEARAAAEKAQKLQQNVATRKRNKQLESRGLVIMRALYGNKIILNNLKSSSETSSESTSEVIDVTIPLNFLVNDSGQLKLHEGVKKSGIMGFCDPCPGRPKELYVEYVYAGNQYKVWFCLVYMVEVQHLILSDGVGRGHFRR 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01699 549 Coils Coil 94 117 - -
Cca06g01699 549 Gene3D DnaJ domain 1 90 IPR036869 -
Cca06g01699 549 Pfam DnaJ-like protein C11, C-terminal 386 524 IPR024586 -
Cca06g01699 549 SMART dnaj_3 11 72 IPR001623 -
Cca06g01699 549 ProSiteProfiles dnaJ domain profile. 12 80 IPR001623 -
Cca06g01699 549 SUPERFAMILY Chaperone J-domain 9 89 IPR036869 -
Cca06g01699 549 PRINTS DnaJ domain signature 72 91 IPR001623 -
Cca06g01699 549 PRINTS DnaJ domain signature 52 72 IPR001623 -
Cca06g01699 549 PRINTS DnaJ domain signature 32 47 IPR001623 -
Cca06g01699 549 PRINTS DnaJ domain signature 14 32 IPR001623 -
Cca06g01699 549 CDD DnaJ 12 69 IPR001623 -
Cca06g01699 549 Coils Coil 393 430 - -
Cca06g01699 549 PANTHER CHAPERONE PROTEIN DNAJ 13 1 525 IPR042162 -
Cca06g01699 549 Pfam DnaJ domain 13 77 IPR001623 -
Cca06g01699 549 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01699 Cca-Chr6 32270987 32280286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01699 14 79 C2H2 Transcription Factor Family AT1G74250 44.118 3.44e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01699 K09531 - gmx:100817782 913.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01699 06 32270987 32280286 Cca06g01699 06 32270987 32280286 ECH