Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01691 ATGAACATGGAAAAGATAAATGGAGTAGCTTTGGAAGATGCAGTATTAATCGGAGGATTGATAGGAGTTCAACTTGTCTACGCGGGGAATGCTGTGTTGATGAGTTATGCTATGTCATTGGGTTTCAGCTCTCATACCATCATCTTTTTAACTTCTCTCGCTACATTCATTATTCTCTTTCCCGTTGCCTTTTGTTTTGAAAGGAGTAAATGGCCACGGCATCCCAGTTTCAAGTTGATTGCACAGATATTGTTTCTTTCATTTGGAGGACTTGTCTTCCAGTTGTTTTTCCTCAAAGGAATCAATCTAACTTCACCAGCAATGGGAACTGCCATGCCAAACCTTGCCCCAGGTCTTATCTTCGTCATCGCTTGGATTTCTGGGTTAGAGAAAGTCAACACAAACCACCACTATAGTAAAGTAAAAATCTTTGGAACATTGCTTTGTGTGTGCGGAGCTCTCACATTGAGCATAATGCAAAGCATTTCTTCTCCAGCAACCGTGATAAGTGGCGCACTTCAATTGTCACGGGTGCCATCAGATTTTACCTTTGACATTCACAAGATAATCGGTTGCCTCTATCTCGTTCTTGCAGTCTTGATTTTGTCGAGCAGCGTTGTCCTGCAGGCTTTTGCTCTCGGAAATTTTCCTGCACCAATGTCCTTAGGTGCAATAACGTCCTTGTTTGGGGCATTCATGACTGCAACTCTTTGGTTACTTGAAAGCCACAAACTGAAAAGTAGATGGATTCTTGTGAGTTCAGCAGACTTGATAGCCTATTGTATTCTGGCAGGTGCTGTGAGTGGAATATGCCTGAGCTTCAACGGGTGGGCACTGAAGAAGAGAGGGCCAGTGTTTGTCTCCATGTTTAGTCCCATTGGTACAGTGTGCTCTGTTGTTTTCTCGGTAATTACCCTTGGAGACACTATTAGAATTGGAAGTCTTGCAGGCATGTTTCTCCTGTTCACTGGGCTCTACTTAGTTCTTTGGGCAAAAGGGAAAGAAGGGCACCCAGAAGTAGATGGCTTAGAGAAATCTTGA 1041 0.4332 MNMEKINGVALEDAVLIGGLIGVQLVYAGNAVLMSYAMSLGFSSHTIIFLTSLATFIILFPVAFCFERSKWPRHPSFKLIAQILFLSFGGLVFQLFFLKGINLTSPAMGTAMPNLAPGLIFVIAWISGLEKVNTNHHYSKVKIFGTLLCVCGALTLSIMQSISSPATVISGALQLSRVPSDFTFDIHKIIGCLYLVLAVLILSSSVVLQAFALGNFPAPMSLGAITSLFGAFMTATLWLLESHKLKSRWILVSSADLIAYCILAGAVSGICLSFNGWALKKRGPVFVSMFSPIGTVCSVVFSVITLGDTIRIGSLAGMFLLFTGLYLVLWAKGKEGHPEVDGLEKS 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01691 346 Pfam EamA-like transporter family 190 329 IPR000620 GO:0016020|GO:0016021
Cca06g01691 346 Pfam EamA-like transporter family 21 157 IPR000620 GO:0016020|GO:0016021
Cca06g01691 346 PANTHER WAT1-RELATED PROTEIN 14 345 - -
Cca06g01691 346 PANTHER WAT1-RELATED PROTEIN 14 345 IPR030184 GO:0016021|GO:0022857
Cca06g01691 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 249 334 - -
Cca06g01691 346 SUPERFAMILY Multidrug resistance efflux transporter EmrE 55 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01691 Cca-Chr6 32166819 32170771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01691 4 345 Nodulin-like Gene Family AT5G47470 54.885 3.45e-127 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01691 - - gmx:100784734 494.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01691 06 32166819 32170771 Cca11g01597 11 39706565 39709843 PCT