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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca06g01673
ATGGAAGAGAATAACAAGAAAAAGAAGAGAATCAGTGATGGGAATCATCATCATCACCCAACGTATCGCGGGGTGCGCATGCGCCAGTGGGGGAAATGGGTATCGGAAATTAGAGAGCCCAAAAAGAAGTCCAGAATATGGCTCGGCACTTTTCCTACGCCCGAGATGGCCGCCCGAGCCCACGACGTTGCGGCCCAAGCTATCAAAGGCTCATCCGCATTCCTCAATTTCCCCGAATTAGCCTCACACCTTCCACGCCCACCCACCACTTCTCCCAAGGATATCCAAGCCGCCGCCGCCAAAGCAGCCGCACTCAATTGTGAGGCCCAGGCCCAGGCCCAACAATCGTCAAATGCGTCGCTAAGCGGTGAGGATGACGCGTTCTTGGACCTTCCTGATCTTTTAATGGACTCGGGTCAGTTTCGTTACTCGTCGCCGTGGCTGGTGGTCGGAGCTGAACATCTAGACTCGGCTTTCCACATCGAAGAGCCTCCGTTCCCTTGGGACTGTTACTAA
516
0.5446
MEENNKKKKRISDGNHHHHPTYRGVRMRQWGKWVSEIREPKKKSRIWLGTFPTPEMAARAHDVAAQAIKGSSAFLNFPELASHLPRPPTTSPKDIQAAAAKAAALNCEAQAQAQQSSNASLSGEDDAFLDLPDLLMDSGQFRYSSPWLVVGAEHLDSAFHIEEPPFPWDCY
171
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca06g01673
171
PANTHER
ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED
8
142
-
-
Cca06g01673
171
CDD
AP2
22
80
IPR001471
GO:0003700|GO:0006355
Cca06g01673
171
SMART
rav1_2
21
84
IPR001471
GO:0003700|GO:0006355
Cca06g01673
171
Gene3D
AP2/ERF domain
21
79
IPR036955
GO:0003700|GO:0006355
Cca06g01673
171
ProSiteProfiles
AP2/ERF domain profile.
21
78
IPR001471
GO:0003700|GO:0006355
Cca06g01673
171
Pfam
AP2 domain
20
70
IPR001471
GO:0003700|GO:0006355
Cca06g01673
171
PRINTS
Ethylene responsive element binding protein signature
22
33
IPR001471
GO:0003700|GO:0006355
Cca06g01673
171
PRINTS
Ethylene responsive element binding protein signature
44
60
IPR001471
GO:0003700|GO:0006355
Cca06g01673
171
SUPERFAMILY
DNA-binding domain
21
79
IPR016177
GO:0003677
Cca06g01673
171
MobiDBLite
consensus disorder prediction
1
23
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca06g01673
Cca-Chr6
32021418
32022014
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca06g01673
8
166
AP2-EREBP Transcription Factor Family
AT2G44940
47.143
1.84e-51
164
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
AP2/ERF-ERF
Cca06g01673
AP2
5.6e-14
CL0081
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca06g01673
-
-
gmx:100817503
219.55
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Cca06g01673
06
32021418
32022014
Cca11g01581
11
39403371
39403646
PCT
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