Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01667 ATGGATGCATTCATCTTCCTCTTCCTCTTCTCTGTTTTCACCTTCCAAAGTTGTATTATTAAGGTCACCTATGCAACAAAATGTGGAGATACAGGTCCTGAAATCCACTATCCATATCAGATAAAGGGTCAGCAACAACATCATGAAGCCCTTCATGGCTTTGAGGTTCTTTGTAAAGACAACATCACCACAATCCACTTTCCATCTTATGGGGACTTGGTAGTGAACTCCATTTCCTATGAAACCAAAAACATTCACCTTCTTGATCCCAAAAACTGCCCCCATCGTGTCTTTCTGAACCTCAACCTCTCCCTTACACCCTTCCACTATTTCCATGTTCTCAAAAACTACACATACCTCAATTGCTCCACCACCCTTCCACATCCTTTCGTGGAGGTTCCATGTTTAAGTGCTTCAACTCATCATGTCTACACCGTTGACCCTGCACTTCCTGTGCCAGGTTCGTGTGAAGGAATCAAAACCGTTGCCATCCCTTTTGCATATAGCCCTTATCTCTCAGACAACAGGCTTGGTCTTAGATTAACATGGGACTCTCAAGACACCGAAACAAGAAACAATACTAGAGGCTCCCACACATGGCGTAATATAGTTATAGGCACCAGCATGATCTGTGTTTTCGTGATGGCGATGCTGATTATAAGTATAAGCATAAAGGTTGGTGGGGCTACGAGGAATCGCCATCAGAAAGAAGGGCAGTTATTGAAGAGTTTCACGGATTTCTAG 744 0.4341 MDAFIFLFLFSVFTFQSCIIKVTYATKCGDTGPEIHYPYQIKGQQQHHEALHGFEVLCKDNITTIHFPSYGDLVVNSISYETKNIHLLDPKNCPHRVFLNLNLSLTPFHYFHVLKNYTYLNCSTTLPHPFVEVPCLSASTHHVYTVDPALPVPGSCEGIKTVAIPFAYSPYLSDNRLGLRLTWDSQDTETRNNTRGSHTWRNIVIGTSMICVFVMAMLIISISIKVGGATRNRHQKEGQLLKSFTDF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01667 247 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 1 239 - -
Cca06g01667 247 PANTHER PROTEIN, PUTATIVE-RELATED 1 239 - -
Cca06g01667 247 Pfam Wall-associated receptor kinase galacturonan-binding 27 89 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01667 Cca-Chr6 31919468 31920722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01667 21 195 C3H Transcription Factor Family AT2G25410 31.383 4.77e-20 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01667 - - gmx:100790327 384.8