Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01644 ATGGAAGAACGGTACGAGACATTGAAGGAGCTTGGTTCGGGGAACTTTGGAGTGGCAAGGTTGGCCAAAGACAAGAAGACAGGGGACCTTGTTGCTATCAAATACATAGAAAGGGGAAAAAAGATTGATGCGAATGTTGAAAGGGAGATAGTTAACCACCGATCTCTAAGGCATCCAAACATTATCAGGTTCAAAGAGgtatttctgacccctactcatttagctattgtcctggagtatgctgctggtggtgaactcttcgagaggatatgcaatgctggtcgattgagtgaagacgaggcaagatttttcttccagcaactaatatctggagttagctattgtcattccatgCAAATATGTCATAGAGATCTGAAATTGGAAAACACTCTATTGGATGGAAATCCAGCTCCACGACTTAAAATTTGTGACTTTGGATTCTCCAAGTCTGCTTTGCTGCACTCTCAACCTAAATCAACAGTTGGAACTCCTGCATACATTGCTCCAGAAGTTTTGTCACGAAAGGAATATGATGGAAAGATTGCAGATGTTTGGTCGTGTGGTGTGACTCTTTACGTCATGTTGGTTGGAGCATACCCATTTGAAGATCCAGAAGATCCTAAAAACTTCAGAAAGAGTATTGGGAGAATTATGAGTGTTCAATACTCCATACCTGACTACGTACGTGTTTCTAAGGAGTGTCGACATCTTATCTCAAGTATTTTTGTTGCCAATCCTGCCAAGAGGATCAGCATCTCGGAGATAAAACAGCACCTTTGGTTTAGGAAGAACTTGCCGAGGGAGATAATTGAGGGTGAAAGAAGGGGCTACGTGGAGATACAAAAGGACCAACCAAGCCAAAGTGTGGAAGAAATCACGCAGATTGTACAAGAAGCCAGGACAAAAATCCAAACTAGTGAACAAGCTGGCATAGAATCGTCCAATGCTGTGCATGGTGGTGATGAGGCTAATGAGGAAGTTGATGTTAATGGCCACCATGCCAAATATCCAGCAGGCCTTCATTAA 1026 0.3616 MEERYETLKELGSGNFGVARLAKDKKTGDLVAIKYIERGKKIDANVEREIVNHRSLRHPNIIRFKEVFLTPTHLAIVLEYAAGGELFERICNAGRLSEDEARFFFQQLISGVSYCHSMQICHRDLKLENTLLDGNPAPRLKICDFGFSKSALLHSQPKSTVGTPAYIAPEVLSRKEYDGKIADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKSIGRIMSVQYSIPDYVRVSKECRHLISSIFVANPAKRISISEIKQHLWFRKNLPREIIEGERRGYVEIQKDQPSQSVEEITQIVQEARTKIQTSEQAGIESSNAVHGGDEANEEVDVNGHHAKYPAGLH 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01644 341 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g01644 341 PANTHER SERINE/THREONINE KINASE 3 333 - -
Cca06g01644 341 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Cca06g01644 341 CDD STKc_SnRK2 4 260 - -
Cca06g01644 341 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 333 - -
Cca06g01644 341 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Cca06g01644 341 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g01644 341 SUPERFAMILY Protein kinase-like (PK-like) 3 285 IPR011009 -
Cca06g01644 341 MobiDBLite consensus disorder prediction 305 329 - -
Cca06g01644 341 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Cca06g01644 341 Coils Coil 289 309 - -
Cca06g01644 341 Gene3D Transferase(Phosphotransferase) domain 1 81 269 - -
Cca06g01644 341 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01644 Cca-Chr6 31672113 31675148 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01644 5 263 CBL-interacting serine-threonine protein kinases AT1G01140 44.074 1.56e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Cca06g01644 Pkinase 8.3e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01644 K14498 - gmx:547790 634.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01644 06 31672113 31675148 Cca06g01644 06 31672113 31675148 ECH
Cca06g01644 06 31672113 31675148 Cca11g01533 11 38485741 38501943 PCT