Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01631 ATGGCTGCCTTAACCCTCTTTATTCCTGCACTCGTCTTTCTTCAGGCTTTGTTAGTTTCCGCAAACATTGATCTGAATACGCCACTTTATACCGGTGAAAAGAGTGCATGGCGTTCACCTTCGGGCGAGTTTGCTTTCGGGTTTTATCAACTGAATAATGACACAGACCGGAACACGACGGGGTTCATGGTTGCCATCTGGTACGACATGATACCCAACAAAACGGTGGTTTGGAGCGCAAAAACAGGCTACACACTTGAAACAGCATCACCGGGATCATACGTGCAGATCAACGAGGAAGGGCTTTGGCTTATAAGACCCGAAGGGAATAATAACATGAAGATAGCGAGTCCCCAAACCGTGGTTACCGGAGGGGCTATGCTTGACACCGGCAACTTCGTTCTCCTTGACGGCAACTCTGAGTATGTGTGGCAAAGTTTCCACAATCCCTCAGACACGCTGTTACCTAGCCAATCTCTCTCTTTGCAGCTCAATGCTAAACTAACTTCTAGATTTAGTGACAGCAATTACGCAGTTGGAAGGTTTCAACTTTATTTTGATCATGGTAATGTCTTGCTGAGTCCCATTGCTTCTCAATTGGGCTACAATTACAACAGTTATTATGTACTCAACGTTTCTGGCAATGCTTCACAGTTAGTGTTCGATAAGTCAGGGGATATCTATGTAGACACCAAGAATGGGACTAGAGTCCGACCTCAAGGTCAAAAATGGTTTAACTTGACTCTGGATCCCAAGGAGAATTACTACAGAGCAACGCTTGACTTCAATGGAGTATTGACGCAGTATGCACATCCGAGGAACAATAGTACAGGGTGGACCATCGTGAGGTATGTTCCTGAAAACATTTGCAATGCAATATTCAATGACTATGGTAGCGGTTCCTGCGGCTATAATAGCTATTGCTCCATGGAAAATGATAGGCCCACTTGCAAATGTCCTTATGGGTATTCATTTGTGGATCCAATTAATAAATTTGGTGGATGCCAACCCAATTTGACCATCGGTTGTGGAGCAGATGTGCAAGCACGGCCAGAAGAGCTATATGAAATGAATCTGGCCAAAAATTTTAATTTTCCATTGGGAGACTATGAAAAGATACAACCTTCATCTCAACAGCAATGCGCAGAATCTTGCTTGCGGGATTGCATGTGTGCTGTTGCAATTTTAGGGGGCAACACTTGCTGGAAGAAGAGATTGCCCCTTGGTAACGGAAGAGAAGTAGAAGTCACTGATAAACATTTTGTGTATATCAAAACAAGAATTAGAGGTGATGCAAACGGGGAACTCCCCTCTGCTCCCGATTCGAAGAAAGAAGATCGAGCTAAGCCAATTCTTTTAGGATCACTTATTGCCTCACTCGTCGTTATCAGTATTCTCCTGGTTGTGGTTGCTTTTCTAATTCTCTTGAAGCCGGAAGTGAAAAGGGTTGTACAAGCTGCCAGTCTTTTGGAAACAAATTTGCATTGGTTTAGTTATGAAGCATTGAAAGAGGCCACATGGGGTTTTAGTGAAGAACTAGGGAGAGGTTCCTGTGCCATTGTTTACAAAGGCAAACTAGAAGGAGCTTCTTGTAACGTGGttgccgtcaagagattggacagattggcccaagaacgagagaaagaatttaggactgaactgagttccattggtaaaacctgccacaaaaatcttgtaagAAGAAGTGTGTTGAAGATGGAGACTGGGGAGGAAGAGAAGGCGATACTGACAGATTGGGCTTATGATTGCTATTTGGAAGGGAGAATAAATGCTATGGTGGAGAAGGATGAGGAGGCCTTGTCTGACAATGGAAGGTTACAAAGGTGGGTGAAAATAGCAATATGGTGCATTCATGAGCAACCTGAAATGAGGCCAACAATGGGGATGGTTATGCAAATGCTAGAAGGCGTTATTGAAGTCCCTAACCCACCTCCCCCTTTTCCCATACATTCGATACCTTAA 1983 0.4181 MAALTLFIPALVFLQALLVSANIDLNTPLYTGEKSAWRSPSGEFAFGFYQLNNDTDRNTTGFMVAIWYDMIPNKTVVWSAKTGYTLETASPGSYVQINEEGLWLIRPEGNNNMKIASPQTVVTGGAMLDTGNFVLLDGNSEYVWQSFHNPSDTLLPSQSLSLQLNAKLTSRFSDSNYAVGRFQLYFDHGNVLLSPIASQLGYNYNSYYVLNVSGNASQLVFDKSGDIYVDTKNGTRVRPQGQKWFNLTLDPKENYYRATLDFNGVLTQYAHPRNNSTGWTIVRYVPENICNAIFNDYGSGSCGYNSYCSMENDRPTCKCPYGYSFVDPINKFGGCQPNLTIGCGADVQARPEELYEMNLAKNFNFPLGDYEKIQPSSQQQCAESCLRDCMCAVAILGGNTCWKKRLPLGNGREVEVTDKHFVYIKTRIRGDANGELPSAPDSKKEDRAKPILLGSLIASLVVISILLVVVAFLILLKPEVKRVVQAASLLETNLHWFSYEALKEATWGFSEELGRGSCAIVYKGKLEGASCNVVAVKRLDRLAQEREKEFRTELSSIGKTCHKNLVRRSVLKMETGEEEKAILTDWAYDCYLEGRINAMVEKDEEALSDNGRLQRWVKIAIWCIHEQPEMRPTMGMVMQMLEGVIEVPNPPPPFPIHSIP 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01631 660 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 567 658 - -
Cca06g01631 660 Gene3D - 18 149 IPR036426 -
Cca06g01631 660 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 7 567 - -
Cca06g01631 660 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 174 IPR036426 -
Cca06g01631 660 Pfam D-mannose binding lectin 75 172 IPR001480 -
Cca06g01631 660 Gene3D Phosphorylase Kinase; domain 1 475 579 - -
Cca06g01631 660 PANTHER MALECTIN/RECEPTOR-LIKE KINASE FAMILY PROTEIN 7 567 - -
Cca06g01631 660 Pfam Protein tyrosine and serine/threonine kinase 509 593 IPR001245 GO:0004672|GO:0006468
Cca06g01631 660 SMART blect_4 26 150 IPR001480 -
Cca06g01631 660 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 567 658 - -
Cca06g01631 660 SUPERFAMILY Protein kinase-like (PK-like) 491 567 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01631 Cca-Chr6 31518305 31520700 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01631 436 567 Receptor kinase-like Gene Family AT3G55550 38.686 7.95e-14 72.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Cca06g01631 B_lectin 3.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01631 - - gmx:100788734 705.671