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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Cca06g01620
ATGGCTCTTTATCTATTCTGTTGTCTTTTTGCTATTACTTTGATTTTCATGCAAACTCTCGCGGACACTTCATGCACAGATTGTTTCATTCATTCTCGGGCAGCATATTATCCGAATTCTGAAGAACACGGGACAGATGTAGGTGCATGTGGTTTTGGTTCCTTTGGTGCTACAGTCAATGGCGGGGATGTATCAGCTGCATCTTCTCTTTATCGAAATGGTGTTGGCTGTGGAGCCTGTTACCAGGTGAGGTGTACCAACAGTGCCTATTGCTCAGAAAATGGTGTAACTGCAGTCATAACTGACCAAGGTTCAAGTGATAACACTGATTTCATTCTTAGCAAACATGCCTTTAGCCGGATGGCTCAAACCACTGATGCAGCTGCTTCTCTATTAGCCCTTGGCGTGGTTGATATTGAATATAGACGTGTTGCATGCAGCTACCCATCTAAGAACATAACATTCAAGATAGATGAGAGCAGCAACAACCCTTATTACTTGGCTTTTGTCATTTGGTATCAACAAGGAAAGAGAGACATAACTGCTGTGCAGCTCTGTGAGACTAAAAACTTAGTGTGCAAGTTACTGGATCGGAGCCATGGAGCGGTGTGGACTAGTGCCTCTCCACCAAGTGGACCTTTGTCTATAAGGATGTTGTTTAGTGATGAAGAAGAGGGAGAAGAAACATGGGTTGTTCCTGTTAATAACATACCCGAAGATTGGAAGGGAGGAGAAACATACGATTCAGGAGTACAAGTGAATCAATAG
768
0.4323
MALYLFCCLFAITLIFMQTLADTSCTDCFIHSRAAYYPNSEEHGTDVGACGFGSFGATVNGGDVSAASSLYRNGVGCGACYQVRCTNSAYCSENGVTAVITDQGSSDNTDFILSKHAFSRMAQTTDAAASLLALGVVDIEYRRVACSYPSKNITFKIDESSNNPYYLAFVIWYQQGKRDITAVQLCETKNLVCKLLDRSHGAVWTSASPPSGPLSIRMLFSDEEEGEETWVVPVNNIPEDWKGGETYDSGVQVNQ
255
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Cca06g01620
255
PANTHER
EXPANSIN-B3
7
254
-
-
Cca06g01620
255
SUPERFAMILY
PHL pollen allergen
151
249
IPR036749
-
Cca06g01620
255
Pfam
Expansin C-terminal domain
153
232
IPR007117
-
Cca06g01620
255
PRINTS
Expansin/Lol pI family signature
46
64
IPR007118
GO:0005576
Cca06g01620
255
PRINTS
Expansin/Lol pI family signature
134
150
IPR007118
GO:0005576
Cca06g01620
255
PRINTS
Expansin/Lol pI family signature
235
249
IPR007118
GO:0005576
Cca06g01620
255
ProSiteProfiles
Expansin, Cellulose-binding-like domain profile.
165
249
IPR007117
-
Cca06g01620
255
Gene3D
-
149
253
IPR036749
-
Cca06g01620
255
Gene3D
-
17
147
IPR036908
-
Cca06g01620
255
PANTHER
EXPANSIN-LIKE B1
7
254
-
-
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Cca06g01620
Cca-Chr6
31340761
31342575
Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Cca06g01620
4
251
Expansin Gene Family
AT4G17030
40.161
5.60e-59
186
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Cca06g01620
-
-
ccaj:109799868
529.25
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Event-related genes
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Gene_1
Chr_1
Start_1
End_1
Gene_2
Chr_2
Start_2
End_2
Event_name
Cca06g01620
06
31340761
31342575
Cca11g01510
11
38115514
38117878
PCT
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