Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01608 ATGGAGCGTACGAGACTCTCGCTCATCTTGATTTCTGTATTGTTCAATGGCATAACTCTAAGTGGTGCTGAACTTCTTGTTCATGACTACTACAAGGAGAAGTGTCCCTTAGCTGAAGACATCGTGAGACACAACGTTGAGGTGGCAGTCTTAAAAGATCCTCGGTTGGCAGCCTCGCTACTTCGCTTGCACTTCCACGATTGTTTTGTCATGGGGTGCGATGCATCGGTGCTTTTGGATAATATTGAGGGCATGACAAGTGAAAAGCTGGCTGGACCAAATCTGAACTCTCTACGTGGATTTGAGCTCATAGACAAGATTAAGTATTTGCTAGAAGAGGAATGTCCCATTACTGTTTCATGTGCTGACATCCTTGCCATGGCTGCACGTGACGCGGTTGAATTGAGAGGAGGACCAAGATGGGAGGTATTGCTAGGGAGGAAGGATTCTCTAGAGTCAAGTTTTAGTGGGGCTAACTTATTCATCCCTGCACCAAATTCCTCTTTAGAGATTCTCATAAATAATTTTAAGCAACAAGGCCTTGACATAGAAGACTTGGTAGTTCTATCAGGTAGCCATACTATAGGAAGAGCAAGATGTCTAAGCTTCAGGCAGAGGATATATGAAGCCAAAGAGGAATATCACTGTGGCTATGATCGTTATAAGCGATACACAAACTTCAGGAGAATCCTGAAGTCTATATGCCCTGTTGAAGGAAGGGACAGCAAATTTGCACCCCTGGATTTTCAAACTCCTAAGAGGTTTGATAACCACTACTTCATAAACATTCTTGAAGGGAAGGGCTTGTTGGGTTCTGATAATGTTCTGATCAGCCAGGACTTGGATGGAAAAATTACAGAGCAGGTGTGGGCTTATGCCTCCAATGAAAAACTTTTCTTTGCTTCATTTGCTAAATCTATGATTAAGATGGGAAACATCAATGTTCTTACAGGAAATGAAGGAGAAATTAGGAGGCATTGTAGGTTTGTCAATGCTTAG 999 0.4264 MERTRLSLILISVLFNGITLSGAELLVHDYYKEKCPLAEDIVRHNVEVAVLKDPRLAASLLRLHFHDCFVMGCDASVLLDNIEGMTSEKLAGPNLNSLRGFELIDKIKYLLEEECPITVSCADILAMAARDAVELRGGPRWEVLLGRKDSLESSFSGANLFIPAPNSSLEILINNFKQQGLDIEDLVVLSGSHTIGRARCLSFRQRIYEAKEEYHCGYDRYKRYTNFRRILKSICPVEGRDSKFAPLDFQTPKRFDNHYFINILEGKGLLGSDNVLISQDLDGKITEQVWAYASNEKLFFASFAKSMIKMGNINVLTGNEGEIRRHCRFVNA 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01608 332 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 PRINTS Plant peroxidase signature 99 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 PRINTS Plant peroxidase signature 118 128 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 PRINTS Plant peroxidase signature 137 152 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 PRINTS Plant peroxidase signature 184 196 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 PRINTS Plant peroxidase signature 305 318 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 PANTHER PEROXIDASE 72-RELATED 5 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 ProSiteProfiles Plant heme peroxidase family profile. 25 331 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 Gene3D Peroxidase, domain 2 163 310 - -
Cca06g01608 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 185 195 IPR019793 -
Cca06g01608 332 SUPERFAMILY Heme-dependent peroxidases 27 331 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601
Cca06g01608 332 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 PRINTS Haem peroxidase superfamily signature 119 136 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 PRINTS Haem peroxidase superfamily signature 137 149 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 PRINTS Haem peroxidase superfamily signature 185 200 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 CDD secretory_peroxidase 26 330 IPR033905 GO:0004601|GO:0042744
Cca06g01608 332 Gene3D - 29 331 - -
Cca06g01608 332 Pfam Peroxidase 42 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01608 332 PANTHER PEROXIDASE 20 5 331 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01608 Cca-Chr6 31246633 31247997 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01608 85 331 Peroxidase AT2G35380 66.802 2.05e-122 350
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01608 K00430 - gmx:100778051 622.854