Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01600 ATGACTTTGACGGAGACGGTGGTGGTGATGGAGAGGTTTAGTATGAGGGGAATGTTGGGCGCCGTGGAGAGGTTTGGAGTAACGCATCTGACGGTGGTGCCGTCAGTGGTGGTGGTTGTGACGAAGGACGGCATCACCGACGGGTACAGTTTGAAGTCGTTGGAATCTGTGGTTCGACTGAATCGCCTCGACCCTTCACAACTTCCCCTTCGACCTAAGGCGGTGTTACTTCTTCTGTCCAAGGTATTTCGTCAATTCCttctccggacctggacttga 279 0.4946 MTLTETVVVMERFSMRGMLGAVERFGVTHLTVVPSVVVVVTKDGITDGYSLKSLESVVRLNRLDPSQLPLRPKAVLLLLSKVFRQFLLRTWT 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01600 92 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 58 - -
Cca06g01600 92 SUPERFAMILY Acetyl-CoA synthetase-like 6 58 - -
Cca06g01600 92 Gene3D - 1 59 - -
Cca06g01600 92 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01600 Cca-Chr6 31159402 31163294 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01600 1 57 Monolignol Biosynthesis Gene Families AT5G63380 38.596 8.48e-08 46.2