Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01599 ATGTGTTGTTCTATGTACATACATAACTATGTATATAGATATGGCAGGAAGGGTATGTACAGGACGCACTTGTTTGGAAACCCTAGCATCATTGTTTGCAGCCCAGAGACGTGTCGTAAGGTTTTGACAGACGATGAACAATTCAAGCTTGGGTACCCTGCTTCCACCATGGCCCTCACAGGAAAGAGATCATTCCATGGCATCTCGAACGTGGAACACAAGCGTCTTCGCCGCCTAACCACCTCTCCCATAACCGGCCACGAGGCATTGTCCACCTACATAGGTCTCATAGAAGGTGTTGCTGTGAAACAGTTGGAAGAGTTGTCTAGCATGAACACCCCTTGTGAGTTCCTCACACAGATGAGGAAGTTCGCTTTTAAGGTCATCACCACCATCTTCATGGACTCTGATGCGGATCATGTCGACCTTGCCTTGGTCGAAAACTTGTACATAGATTTGAATCGGGGACTCAAGTCACTTGCTATCAATCTCCCTGGCTTTGCCTTCTATAAAGCCCTCAAGGCACGAAAGAAGTTGATGAAGTTGCTGCAAGGCTTGGTGAACCAAAAGAGAAGGACCAATAATACAAAAACAAAGAAAGATATGATGGATTTGTTGATGGAAGTCAAAGATGAAGACGGTAGGCAGCTGGAGGATGAAGACATCATAGACTTACTTCTGGTGTTCTTGTTAGCTGGTCACGAAAGTTCTGCTCATGGAATATTGTGGACCATAATCTACCTCATGGAACACCCACATGTCCTCCAAAGGGCCAAGGAAGAACAAGAAGAGATCATGGAAATAAGACCTTCCACGCAGAAAGGGCTCAACATTAAGGAAATTAAGCAAATGGAGTATCTATCAAAGGTTATCGATGAGATGCTGCGCAGAACAAGTATTTCGTTTGCAAACTTTAGACAGGCAAAGGTAGATGTGAACATCAATGGTTATACTATACCAAAAGGATGGAAAGTTTTAGTTTGGAGCCGAGGGGTTCACATGGATCCTGAAACTTACCGTAATCCAAAAGAATACGATCCTTCTAGATGGGAAAATCACACAGCAAGAGCAGGTTCTTTCCTTCCGTTTGGATTAGGAAGCAGGTTTTGTCCCGGGAGTGACTTGGCCAAACTTGAGATCACTATTTTTCTCCATCATTTTCTTCTTAACTACAGGATGGAGAGAATGAATCCAGAGTGTCCAGTGACTTACCTACCAGTGCCAAGGCCTTCAGACAACTGCACTGCAAGAATTATAAAAGTCACATAA 1269 0.4389 MCCSMYIHNYVYRYGRKGMYRTHLFGNPSIIVCSPETCRKVLTDDEQFKLGYPASTMALTGKRSFHGISNVEHKRLRRLTTSPITGHEALSTYIGLIEGVAVKQLEELSSMNTPCEFLTQMRKFAFKVITTIFMDSDADHVDLALVENLYIDLNRGLKSLAINLPGFAFYKALKARKKLMKLLQGLVNQKRRTNNTKTKKDMMDLLMEVKDEDGRQLEDEDIIDLLLVFLLAGHESSAHGILWTIIYLMEHPHVLQRAKEEQEEIMEIRPSTQKGLNIKEIKQMEYLSKVIDEMLRRTSISFANFRQAKVDVNINGYTIPKGWKVLVWSRGVHMDPETYRNPKEYDPSRWENHTARAGSFLPFGLGSRFCPGSDLAKLEITIFLHHFLLNYRMERMNPECPVTYLPVPRPSDNCTARIIKVT 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01599 422 Pfam Cytochrome P450 7 397 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01599 422 PRINTS E-class P450 group I signature 241 267 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01599 422 PRINTS E-class P450 group I signature 360 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01599 422 PRINTS E-class P450 group I signature 370 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01599 422 PRINTS E-class P450 group I signature 328 352 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01599 422 PRINTS E-class P450 group I signature 221 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01599 422 Gene3D Cytochrome P450 4 421 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01599 422 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 363 372 IPR017972 GO:0005506|GO:0016705
Cca06g01599 422 PRINTS P450 superfamily signature 232 249 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01599 422 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01599 422 PRINTS P450 superfamily signature 361 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01599 422 PRINTS P450 superfamily signature 289 300 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01599 422 PANTHER CYTOCHROME P450 26 5 399 - -
Cca06g01599 422 PANTHER CYTOCHROME P450 88D6 5 399 - -
Cca06g01599 422 SUPERFAMILY Cytochrome P450 6 418 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01599 Cca-Chr6 31155152 31157913 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01599 6 420 Cytochrome P450 AT2G32440 56.459 7.09e-176 498
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01599 K04123 - qsu:112005461 599.356