Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01597 ATGGGAAGCAATAGCAATGGCCTCTGCAACCTCTTATCCTGCTTCAAACCCTccaatacaaacacgcctaaccacaaccaacaccaacaccagcaccaacTCGTTTTCGCCGAAGCAGAGCCTCCATTGGACGAAACCCTAGGCCACTCCTTCTGCTACGTCAGATcctccgcccgcttcctctccccctcccactccgaccgcctcctctccccctccgcctccctccgcttctccgaaaccgcctTCAAGGCCATCTCCGGCGCCTCCGTCAGCGCCAACAGCTCCGTCCCCAAAACCGTCCTGCAGTCCGACCAGGACGCCGCCCTCAATGGCTTCAAGGGAACCTCCTCCTTCACCGCCCTCCCGCTCCAGCCGGTCCCCCGTGGAGAGGGCGACAGAGAGAGAGACCGGAGGGCCTTCTTCCTCTCCGGCCCAATTGAGAGCGGCGCCCTCTCCGGACCCCTCGACGACGCCGTTTCCACCTCCGCCGCGGGAGTGCCGTTCTCCGCTCCGCTCGTCTACGTTAAGAAGAAGCGCAAGAAGAGCATTGCGGGGCTCAGAAAGGCCTTCCAGCGCAGCCTGTCGGAGAAGAAGCGTCCCTGGGTGGTTCCGGTGGgccgaaaggggaagaccgaggccaaagacgaagccgataccgagagcAATGTGCAGTGGGCGCTCGGAAAAGCCGGGGAGGATCGTGTGCATGTGGTTGTATCGGAGGAGCAGGGTTGGTTGTTCGTTGGGATTTACGACGGTTTCAACGGCCCCGATGCGCCCGAGTTTCTCATGGCTAATCTTTACCGTGCTGTTCACAAAGAGCTTCAGGGTTTGTTTTGGGAGCTTGAAgaccctgcaccggaacctcaacctccacccgaacACCACAATGAGGTTGAAGAGGACTCTAATAACTCTCTCCAAGGATCCGTTAAGAGAGTCACGTTTCAAGCGGAGGGGACTGAGAGTAGGAGGCGGAGGCTGTGGGAATTTCTCGCTGAGGATGACGATGAGGCTGAGGACGGCCTTGATCTCTCTGGCTCGGATAGGTTTGCGTTTTCGGTGGATGATGCTCTGAGTGTTAGCAAGGAGGGTTCGGGGGGTGGTAGTAGAAGGTGGTTGATTTTGTCTAAACTGAAGCATGGTTTGTCGAGGCATAAGGAGGGGCATGGGAGGGGGTTGTTGCCGTGGAGCTTTGGTGTTGGGGCGGAGGACAAGGAGAAGGTTGAGGTGGAAAATTTGCCGCCTCCGCCggaggaggagggggagaagtgtggcggtgggaggaggcggaAAGTGGGGCCTGTGGATCATGAGTTGGTTTTGGGGGCGTTGTCTAGGGCGCTTGAGATGACTGAGCTTGCTTATTTGGATATGACGGATAAGCTTATTGATTCCAATCCGGAGCTTGCTTTGATGGGGTCGTGTCTGTTGGTTGTGTTGATGAGGGATGAGGATGTTTATGTGATGAACGTGGGGGATAGCCGCGCCATTGTGGCGCATTATGAGTGCAAAGAGGTTCATTCTAGCAAGGAATCGGGGAGCGGTGGAGATGTTGGGTCAAGCGGGGAGTGCATTGTGGAGGAGTCCTTAGCTCCGGATGAAGGTGCTGCTGAAGAGAGGAGGTTGGTTGCATTGCAGCTCTCCACTGACCACAGCACCAGCATTGAAGAGGAAGTTATTAGGATTAAGAATGAACATCCTGATGATAGTCATTGTATTGTAAATGATAGAGTCAAAGGCCGTCTTAAGGTTACTAGAGCTTTTGGAGCTGGATTTTTGAAACAGCCGAAGTGGAATGATGTAGTACTAGAAATGTTTCGTAATGAATATATTGGCACTGCTCCATATATATCCTGCTGCCCTTCTCTACGTCACCATAGATTATGCCCAAGAGATCAGTTCTTGATCCTCTCATCTGACGGGTTGTATCAATATCTAAGCAATGAAGAAGTGGTTTCTCAAGTTGAGAGTTTCATGGAAAAGTTTCCAGATGGAGATCCTGCACAGCATTTAATAGAGGAGCTGCTCCTACGTGCAGCTAGAAAGGCTGGAATGGATTTCCACGAGTTGCTGGACATCCCTCAAGGAGATCGGAGGAAGTATCATGATGATGTTACTGTGATGGTGATATCGCTTGAAGGAAGAATCTGGAAATCGTCAGGGAAGTATCTGTGA 2181 0.4631 MGSNSNGLCNLLSCFKPSNTNTPNHNQHQHQHQLVFAEAEPPLDETLGHSFCYVRSSARFLSPSHSDRLLSPSASLRFSETAFKAISGASVSANSSVPKTVLQSDQDAALNGFKGTSSFTALPLQPVPRGEGDRERDRRAFFLSGPIESGALSGPLDDAVSTSAAGVPFSAPLVYVKKKRKKSIAGLRKAFQRSLSEKKRPWVVPVGRKGKTEAKDEADTESNVQWALGKAGEDRVHVVVSEEQGWLFVGIYDGFNGPDAPEFLMANLYRAVHKELQGLFWELEDPAPEPQPPPEHHNEVEEDSNNSLQGSVKRVTFQAEGTESRRRRLWEFLAEDDDEAEDGLDLSGSDRFAFSVDDALSVSKEGSGGGSRRWLILSKLKHGLSRHKEGHGRGLLPWSFGVGAEDKEKVEVENLPPPPEEEGEKCGGGRRRKVGPVDHELVLGALSRALEMTELAYLDMTDKLIDSNPELALMGSCLLVVLMRDEDVYVMNVGDSRAIVAHYECKEVHSSKESGSGGDVGSSGECIVEESLAPDEGAAEERRLVALQLSTDHSTSIEEEVIRIKNEHPDDSHCIVNDRVKGRLKVTRAFGAGFLKQPKWNDVVLEMFRNEYIGTAPYISCCPSLRHHRLCPRDQFLILSSDGLYQYLSNEEVVSQVESFMEKFPDGDPAQHLIEELLLRAARKAGMDFHELLDIPQGDRRKYHDDVTVMVISLEGRIWKSSGKYL 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01597 726 MobiDBLite consensus disorder prediction 304 318 - -
Cca06g01597 726 MobiDBLite consensus disorder prediction 284 319 - -
Cca06g01597 726 Pfam Protein phosphatase 2C 548 683 IPR001932 -
Cca06g01597 726 SMART PP2C_4 217 712 IPR001932 -
Cca06g01597 726 ProSiteProfiles PPM-type phosphatase domain profile. 217 714 IPR001932 -
Cca06g01597 726 PANTHER PROTEIN PHOSPHATASE 2C 29 30 724 - -
Cca06g01597 726 Gene3D - 404 721 IPR036457 -
Cca06g01597 726 Gene3D - 189 365 IPR036457 -
Cca06g01597 726 CDD PP2Cc 438 714 IPR001932 -
Cca06g01597 726 MobiDBLite consensus disorder prediction 289 303 - -
Cca06g01597 726 SUPERFAMILY PP2C-like 229 715 IPR036457 -
Cca06g01597 726 PANTHER PROTEIN PHOSPHATASE 2C 30 724 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01597 Cca-Chr6 31113571 31118418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01597 1 726 PP2C-type Phosphatase Gene Family AT2G35350 55.817 0.0 759
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01597 - - gmx:100775371 1156.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01597 06 31113571 31118418 Cca11g01493 11 37790201 37796107 PCT