Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01591 ATGGTTGCGCAGTCTCTGGACGTGGTTCACCAGCATATAATGGTTGCTATGAGAGCGGAAAAGAGTTCCAATTCCAAAGCTAAGGCCAAGAATGCCGGAAAAGGGCCCAAGGGGGGGAAGAAATCGAACGCTTCCGCAATGCCGCGGAGGTCGAGCGCTCGAATCCAAGCGTTGAAGAAAGCGGAGGAGGAGGTTCTTGCTCGTCAAAAGTCCGAGGAGATTCCTTCTCGTCAAGAAGCGGTGTTAGTCGAGGACAAAGACGAATGCGACGAGGTTGCCGCCAAGCCGAAGAAGAAGCACCGAACAAAGAGTGGCGGCGAGGAGGAAGAAGACGCTGCCTCACGGCCGAGGAAGAAGAAGAAGCCGGCGGTGGCGGCATGCCCCAACGGTGACGTGAGTGCGAAGGAAGAATCGGAGAATGTGGCCGGGGTTGGTGGTTCCGGAGAGAAGAGTGACTTGGCTAAGGTCAAAGAGACCATTAGGATATTTAATAAATACTATCTGCATTTTATTCAGGAAGAAGAGAAGAGGTGTGCGAGGGATGATGCTAGTAAGGGTTCTAAGAATGCTTCCAAATCCAAGAAGAAAGATTCAAAGAATGGATCTAAAAAGGATTCGAATTTCAGGAAGAAAGATGCTACACCACCACCTAAAGATTCAAAGAAGGGTTCTAAACGACCAGATCTAAAGGCCATAACGAAGATGATGGGAAACAACGAGATACTGTACCCTGAAAAAAGAATCGGCAGCATTCCAGGTATTCAGGTTGGGTATCAGTTCTATTCTCGTGCTGAAATGGTTGCAGTTGGTTTTCATAGCCACTGGTTAAATGGCATCGATTTTGTTGGCATGGCTTATTCCAAAGTGTATAGCAACTATGAATTACCAGTTGCTGTTGCAATTGTTTTATCAGGCATGTATGAGGACGACTTGGACAACGCTGAGGATGTCATCTACACAGGTCAAGGGGGACATAATCTGACAGGTAATAAGCGGCAAATTAAGGACCAGTTGTTGGAGCGGGGTAACCTGGCTCTCAAGAATTGTGCTGAGCAATGTGTGCCTGTTAGAGTCATTCGTGGTCATGGATCTTCAAGCAGTTACACTAAGAAAGTATACACATATGATGGCTTGTACAAGGTTGTCAATTATTGGGCAGAGAAGGGAATCTCTGGGTTTACTGTCTACAAGTTTCGACTTAGGAGGCTGGAAGGGCAATCTACATTAACCACAAATCAGGTGTATTTTACCAATGGACGGGTACCGCGTTCTTTAGCGGAAATACGAGGTTTGGTTTGTGAGGATATCAGTGGAGGTCAAGAAGATGTGCCCATTCCGGCTACCAATTTGGTTGATGATCCCCCTGTTCCACCTACAGGTTTTACATATTGTAAGTATGTTAAGGTTGCAAAAAATGTGAAGCTTCCCACCAGTGTCTCTGGGTGCAGATGCAAAGGGGATGGTTGTAGGGACCCAACAACCTGTGCATGTGCGACGCTTAATGACTCTGATTTTCCCTATGTATCTCACAATGGTGGCAGGTTAGTTGAAGCGAAAGATGTTGTATTTGAATGTGGTCCCAAATGTGGTTGTGGTCCTAATTGTGTGAACCGAACTTCTCAAAAGCCGCCGAGATATCGGCTGGAGGTTTTCCGCACTGCCAAAAAAGGATGGGCTGTTAGATCCTGGGATTTTATACCTTCTGGAGCGCCAGTTTGTGAGTACACAGGAATACTTGCTAGAACGGAAGATATGGACAGTGTATTGGAAAACAATTATATTTTTGAGATTGATTGCTTGCAAACAATCAAGGGTCTTGGTGGAAGAGAGAGGCGGTCACAAGATGGGGAGATTCCTACAAATCTTTTGGGAAAATATGATGATCAAAGTTCTGAAAGTGCACCAGAGTTTTGCATTGATGCAGGGTCTACTGGAAATGTTGCTAGGTTTATAAACCATTGTTGTGAGCCTAATCTATTTGTTCAATGTGTCTTGAGCACACACCATGATTTGAGATTGGCTCGTGTGATGCTGTTTGCCGCCGACAACATACCTCCTTTGCAGGAACTAACCTATGACTATGGTTATGCGCTTGACAGCGTCTTGGACTCTGATGGAAATATTAAGCAAATGCCATGCTATTGTGGAGCTCCAGAGTGCAGGAAGCGATTATTCTAA 2178 0.4568 MVAQSLDVVHQHIMVAMRAEKSSNSKAKAKNAGKGPKGGKKSNASAMPRRSSARIQALKKAEEEVLARQKSEEIPSRQEAVLVEDKDECDEVAAKPKKKHRTKSGGEEEEDAASRPRKKKKPAVAACPNGDVSAKEESENVAGVGGSGEKSDLAKVKETIRIFNKYYLHFIQEEEKRCARDDASKGSKNASKSKKKDSKNGSKKDSNFRKKDATPPPKDSKKGSKRPDLKAITKMMGNNEILYPEKRIGSIPGIQVGYQFYSRAEMVAVGFHSHWLNGIDFVGMAYSKVYSNYELPVAVAIVLSGMYEDDLDNAEDVIYTGQGGHNLTGNKRQIKDQLLERGNLALKNCAEQCVPVRVIRGHGSSSSYTKKVYTYDGLYKVVNYWAEKGISGFTVYKFRLRRLEGQSTLTTNQVYFTNGRVPRSLAEIRGLVCEDISGGQEDVPIPATNLVDDPPVPPTGFTYCKYVKVAKNVKLPTSVSGCRCKGDGCRDPTTCACATLNDSDFPYVSHNGGRLVEAKDVVFECGPKCGCGPNCVNRTSQKPPRYRLEVFRTAKKGWAVRSWDFIPSGAPVCEYTGILARTEDMDSVLENNYIFEIDCLQTIKGLGGRERRSQDGEIPTNLLGKYDDQSSESAPEFCIDAGSTGNVARFINHCCEPNLFVQCVLSTHHDLRLARVMLFAADNIPPLQELTYDYGYALDSVLDSDGNIKQMPCYCGAPECRKRLF 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01591 725 Pfam SAD/SRA domain 248 406 IPR003105 -
Cca06g01591 725 SUPERFAMILY SET domain 430 701 IPR046341 -
Cca06g01591 725 ProSiteProfiles Pre-SET domain profile. 480 543 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Cca06g01591 725 SMART G9a_1 244 406 IPR003105 -
Cca06g01591 725 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 57 725 IPR025794 GO:0016571
Cca06g01591 725 Pfam SET domain 557 695 IPR001214 GO:0005515
Cca06g01591 725 SMART preset_2 433 530 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Cca06g01591 725 MobiDBLite consensus disorder prediction 17 151 - -
Cca06g01591 725 Pfam Pre-SET motif 437 538 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Cca06g01591 725 ProSiteProfiles Post-SET domain profile. 709 725 IPR003616 -
Cca06g01591 725 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE, H3 LYSINE-9 SPECIFIC SUVH4 48 724 - -
Cca06g01591 725 SMART PostSET_3 709 725 IPR003616 -
Cca06g01591 725 ProSiteProfiles YDG domain profile. 249 402 IPR003105 -
Cca06g01591 725 SMART set_7 546 701 IPR001214 GO:0005515
Cca06g01591 725 MobiDBLite consensus disorder prediction 55 118 - -
Cca06g01591 725 SUPERFAMILY PUA domain-like 231 421 IPR015947 -
Cca06g01591 725 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 48 724 - -
Cca06g01591 725 MobiDBLite consensus disorder prediction 177 229 - -
Cca06g01591 725 Gene3D SET domain 426 725 IPR046341 -
Cca06g01591 725 Gene3D - 232 419 IPR036987 -
Cca06g01591 725 MobiDBLite consensus disorder prediction 177 230 - -
Cca06g01591 725 ProSiteProfiles SET domain profile. 546 695 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01591 Cca-Chr6 31079903 31082722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01591 235 725 EF-hand Containing Proteins AT5G13960 68.699 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Cca06g01591 SAD_SRA 9.2e-49 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01591 K11420 - gmx:100796701 1044.65