Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01548 ATGGCACTTACCTCGTGCTTATCCCTTCCAAACACTCCCACCTTCTCTGCTTTCACCCAACTATACTCTTCCTCTCACCATTTCCTTTTCCACCCACAATTTAAGTCTCTCTGGGGCCCAGAAGCGCGGCCCGTGGCGGCCCATTTGTGTAACCGAAAGAAGGGAAGGTCGAGGAAGCTTAGTTCGTTGAGCGAAGGAGTGAGTGGGAGTGTAAATGAAGATAGCTACCATGGGTCCATGGAGGACAAACAATTCGTGCGTTCGTTCCGCGAGGCCTGGCCTTACTTATGGGCCTATCGTGGCAGCACTTTTGTTCTCATTATTTCCGGTGAAATTGTCTCTAGTTCTTTCTTGGATCCCGTTCTCAAGGATATAGCTTTCCTTCATCACCTAGGAATCCGCTTTGTTATTGTTCCGGGTACACATGTGCAAATAGACAAGCTTTTGAAAGAGAGAGGGTGCAAGCCTAAGTATGTTGGTAGATATAGGATAACTGATGATGAATCTCTAGAAGCTGCAATGGAAGCAGCCGGAGGAATAAGATTGATGATAGAAGCAAAACTTTCTCCTGGACCTTCCATATGCAATATTCGTCGACATGGTGACAATAGTCGTTGGCATGACGTTGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCAGCCAAGAGAAGAGGGGTGGTCAATGGAATTGATTTTGGGTCAACTGGGGAAGTTAAAAAAGTAGACGTATCTCGCATGCGTGAGAGACTTGATGGTGGTTGTGTAGTTATTTTAACCAACTTGGGCTACTCCAGCTCTGGAGAAGTATTAAATTGCAATACCTATGAAGTTGCAACAGCTTGTGCCTTGGCTATAGGAGCAGACAAACTTATATGCGTTATAGATGGTCCAATACTTGATGAGAGTGGACGCCTAATTCGTTTCTTGCCTCTTCAAGAAGCAGACATGTTAATTCGTAAACGGGCTGAGCAAAGTGAAGCAGCTGCTAACTATGTGAAAGCTGTTGATGAAGAAGGTTTCAACTCTCTTGAGAATGGAAGTTTTAATGGGACAGTCAAATCTCCACCTATTGGACGTTTTACAGAATGGCATAATGCAACCTTCAATAATGGCATTGGTTTCGATAATGGAAATGGCTTAGGGTCTGGTGAGCAGGGTTTTGCTATTGGAGGTCAAGAGCGGCTCAGTCGAATGAATGGCTACCTTTCAGAATTGGCTGCTGCAGCTTTCGTTTGCAGAGGTGGTGTTCAAAGAGTTCACTTGTTGGATGGAACTATTAGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGAGATGGGATGGGAACAATGGTGGCTAGTGACCTTTACGAAGGTACTCGGACAGCAGAGGTGAAAGATATTTCTGGAATAAAACAACTTATTCAGCCTTTGGAGGCATCTGGAATATTGGTTAAGCGGACTGATGAAGAGCTGTTACAAACATTGGATTCATTTGTCGTTGTGGAAAGAGAAGGTCAAATAATTGCTTGTGCTGCCCTTTTCCCCCACTTGGAGGAGAAACGCGGAGAAGTTGCTTGCATTGCAGTATCTCCTGATTGTCGTGGCCAAGGGCAGGGTGACAAATTGCTTGATTATTTGGAGAAGAAAGCATCATCTCTTGGATTGAATATGCTTTTCCTGCTTACAACACGTACAGCAGATTGGTTTGTGAGACGTGGGTTTTCAGAATGTTCAATTGATTATATTCCTGAAAAGAAAAGGAGAATGATCAATCTTTCCCGCAATTCTAAGTATTATATGAAGAAGCTCCTACCAAATAAAAGTGGAATTACTGTTGATGTAAAATCTGCTTCAAGTTAG 1839 0.435 MALTSCLSLPNTPTFSAFTQLYSSSHHFLFHPQFKSLWGPEARPVAAHLCNRKKGRSRKLSSLSEGVSGSVNEDSYHGSMEDKQFVRSFREAWPYLWAYRGSTFVLIISGEIVSSSFLDPVLKDIAFLHHLGIRFVIVPGTHVQIDKLLKERGCKPKYVGRYRITDDESLEAAMEAAGGIRLMIEAKLSPGPSICNIRRHGDNSRWHDVGVSVASGNFLAAKRRGVVNGIDFGSTGEVKKVDVSRMRERLDGGCVVILTNLGYSSSGEVLNCNTYEVATACALAIGADKLICVIDGPILDESGRLIRFLPLQEADMLIRKRAEQSEAAANYVKAVDEEGFNSLENGSFNGTVKSPPIGRFTEWHNATFNNGIGFDNGNGLGSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRTAEVKDISGIKQLIQPLEASGILVKRTDEELLQTLDSFVVVEREGQIIACAALFPHLEEKRGEVACIAVSPDCRGQGQGDKLLDYLEKKASSLGLNMLFLLTTRTADWFVRRGFSECSIDYIPEKKRRMINLSRNSKYYMKKLLPNKSGITVDVKSASS 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01548 612 Hamap Amino-acid acetyltransferase [argA]. 80 596 IPR010167 GO:0004042|GO:0005737|GO:0006526
Cca06g01548 612 Gene3D - 450 596 - -
Cca06g01548 612 CDD NAT_SF 491 553 - -
Cca06g01548 612 Pfam Acetyltransferase (GNAT) family 487 555 IPR000182 GO:0016407
Cca06g01548 612 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 450 598 IPR000182 GO:0016407
Cca06g01548 612 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 453 600 IPR016181 -
Cca06g01548 612 SUPERFAMILY Carbamate kinase-like 83 320 IPR036393 -
Cca06g01548 612 Gene3D - 83 449 IPR036393 -
Cca06g01548 612 SUPERFAMILY Carbamate kinase-like 398 446 IPR036393 -
Cca06g01548 612 CDD AAK_NAGS-ABP 84 444 IPR033719 -
Cca06g01548 612 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 405 596 IPR010167 GO:0004042|GO:0005737|GO:0006526
Cca06g01548 612 PANTHER AMINO-ACID ACETYLTRANSFERASE 60 603 IPR010167 GO:0004042|GO:0005737|GO:0006526
Cca06g01548 612 Pfam Amino acid kinase family 105 334 IPR001048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01548 Cca-Chr6 30515923 30521468 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca06g01548 AA_kinase 3.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01548 K14682 - gmx:100777694 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01548 06 30515923 30521468 Cca11g01434 11 36445572 36457410 PCT