Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01527 ATGGGTGAAGTGGTTGTGAGAGAGTTCGAGCCGAACAAAGACAGAGAGAAAGTAGAAGCCGTTGAAAGGATATGCGAGGTTGGACCCAGGGGCAAGATTTCTCTCTTCACCGACATGCTCGGTGACCCGATTTGCAGGGTGGCGGAGATTGGAGAAGAGATAGTGGGAATGATAAGAGGATGCATAAAAACAGTAACATGCGGGAAAAGGCTATCAAGAAACGGAAAACACAACAAGACTAATGCTAAAGAGGTTCCAGTGTACACGAGAGTGGCCTACATATTAGGCCTTCGTGTATCTCCTGATCAACGGAGAATGGGAATAGGGTTGAAGCTAGTGAAGAGAATGGAGGCGTGGTTCAGAGAAAACGGCGCTGAGTACTCCTACATGGCAACGGAAAACGACAACTTAGCGTCCGTTAAACTCTTCACCGACAAATGCGGCTATTCAAAGTTCCGTACCCCGTCCGTCCTTGTCAACCCCGTTTTCGCACACCGAGAGAGGGTATCCTCAAAGGTCACCATCATTCCGCTTTCTCCCTCGCACGCCGAGATTCTCTACCGTCGCAGATTCTCCACCACCGAGTTCTTCCCGCGCGACATTGATTCCGTTCTCAACAACAAGCTCACTCTGGGCACCTTCCTCGCTGTCCCGAGCGGGTTCTGCAGGGCCGAGACATGGCCCGGCCCAGATCTTTTCCTGTCGGACCCACCCCACTCTTGGGCCCTCGTCAGCGTCTGGAACTCAAAGGAAGTCTTCACGCTCGAGGTGCAAGGCGCGTCGCGCGTGAAGCGCACGCTCGCCAAGACCTCGCGGGTGGTGGACCGGGCCCTGCCCTGGCTGCGGTTACCGTCGTTTCCGGATTTGTTCAGTCCGTTCGGGTTTCACTTCATGTACGGGCTTGGTGGGGAAGGCCCAGAGGCGTTGAAGATGGTTAAGGCCCTGTGTGGGTTCGTGCATAACCTCGCTATGGAAAAGGGGTGCAGGGTGGTGGTCACTGAAGTGTCACCCAACGAGCCCTTAAGGTTCGGGATACCCCACTGGAAGATGCTGTCGTGGGACGAAGATTTGTGGTGTATGAAGCGGTTGGGCGAAGATTACAGTGATGGTTCCGTTGGTGACTGGACCAAATCTCAACCCGCCATGTCCATTTTTGTTGACCCGAGAGAGGTCTAA 1176 0.54 MGEVVVREFEPNKDREKVEAVERICEVGPRGKISLFTDMLGDPICRVAEIGEEIVGMIRGCIKTVTCGKRLSRNGKHNKTNAKEVPVYTRVAYILGLRVSPDQRRMGIGLKLVKRMEAWFRENGAEYSYMATENDNLASVKLFTDKCGYSKFRTPSVLVNPVFAHRERVSSKVTIIPLSPSHAEILYRRRFSTTEFFPRDIDSVLNNKLTLGTFLAVPSGFCRAETWPGPDLFLSDPPHSWALVSVWNSKEVFTLEVQGASRVKRTLAKTSRVVDRALPWLRLPSFPDLFSPFGFHFMYGLGGEGPEALKMVKALCGFVHNLAMEKGCRVVVTEVSPNEPLRFGIPHWKMLSWDEDLWCMKRLGEDYSDGSVGDWTKSQPAMSIFVDPREV 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01527 391 Pfam Acetyltransferase (GNAT) family 41 149 IPR000182 GO:0016407
Cca06g01527 391 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 5 151 IPR016181 -
Cca06g01527 391 PANTHER N-ACETYLTRANSFERASE 4 390 - -
Cca06g01527 391 CDD NAT_SF 47 127 - -
Cca06g01527 391 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 4 169 IPR000182 GO:0016407
Cca06g01527 391 Gene3D - 5 156 - -
Cca06g01527 391 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE-RELATED 4 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01527 Cca-Chr6 30286709 30288665 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Cca06g01527 Acetyltransf_1 1.4e-17 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01527 - - gmx:100800613 684.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01527 06 30286709 30288665 Cca11g01413 11 36216011 36217487 PCT