Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01524 ATGGCTCAGCTTAACCTTACACTACTTGTCTGTCTATTCTTCTTGGGTCTTTGCCTTTATCCGTGTCCTACTTCGGCCCAGCTTAGTCGACACCACTATGCCAAAACATGCCCCAATGTCGAGAACATCGTCAGAGAAGCAGTCAAAAAGAAGTTTCATCAAACCTTTGTCACGGTTCCTGCTACCATTCGTCTCTTCTTCCATGATTGCTTCGTGCAGGGTTGTGATGCCTCGGTTTTGGTTTCATCGACGGGAAACAACAAAGCAGAGAAGGATCACCCTGATAATCTTTCACTCGCTGGAGATGGGTTTGACACGGTGATTAAAGCAAAAGCAGCAGTGGATGCAGTTCCACTCTGCAGGAACAAAGTTTCATGTGCTGATATTCTAGCCATGGCAACCCGGGATGTTATTGCACTGGCTGGTGGGCCTTTCTACCAAGTTGAATTGGGAAGATTTGATGGGCTAAGATCTAAAGCTTCTGATGTGAACGGGAGGCTGCCTCAGCCAGAGTTCAACTTGAATCAGCTTAATTCACTGTTTGCGGCCAACGGTCTCACCCAAACGGAAATGATAGCCCTATCAGGAGCCCACACCGTTGGATTCTCGCATTGCAACAAATTCTCGAAGAGAGTATACAATTTCAAGAACAAAAGTCGAGTGGACCCTACATTGAACGAGAAATACGCATCAGAGCTAAGATCAATGTGTCCAAGGAATGTGGATCCAAGGATCGCGATCGATATGGACCCAGCAACGCCACGGTCATTCGACCATGTTTATTTCAAGAATCTTCAGCAAGGGAAGGGCCTATTCTCCTCAGACCAAGTCCTCTTCTCGGACCCAAGGTCCAAGCCCACAGTAAATGCCTTTGCTAGTAGCAGCAAAATCTTTCATGCCAACTTCGCTGCTGCCATGACCAAATTGGGCCGAGTTGGTATCAAGAATGCTCAGAATGGAAACATTCGTACCGATTGTTCAGTCATTTAA 990 0.4667 MAQLNLTLLVCLFFLGLCLYPCPTSAQLSRHHYAKTCPNVENIVREAVKKKFHQTFVTVPATIRLFFHDCFVQGCDASVLVSSTGNNKAEKDHPDNLSLAGDGFDTVIKAKAAVDAVPLCRNKVSCADILAMATRDVIALAGGPFYQVELGRFDGLRSKASDVNGRLPQPEFNLNQLNSLFAANGLTQTEMIALSGAHTVGFSHCNKFSKRVYNFKNKSRVDPTLNEKYASELRSMCPRNVDPRIAIDMDPATPRSFDHVYFKNLQQGKGLFSSDQVLFSDPRSKPTVNAFASSSKIFHANFAAAMTKLGRVGIKNAQNGNIRTDCSVI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01524 329 Gene3D Peroxidase, domain 2 168 309 - -
Cca06g01524 329 ProSiteProfiles Plant heme peroxidase family profile. 27 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01524 329 Pfam Peroxidase 44 294 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01524 329 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01524 329 PRINTS Haem peroxidase superfamily signature 124 141 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01524 329 PRINTS Haem peroxidase superfamily signature 142 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01524 329 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01524 329 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601|GO:0006979|GO:0020037
Cca06g01524 329 PANTHER - 3 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01524 329 CDD secretory_peroxidase 27 329 IPR033905 GO:0004601|GO:0042744
Cca06g01524 329 SUPERFAMILY Heme-dependent peroxidases 27 328 IPR010255 GO:0004601|GO:0006979|GO:0020037
Cca06g01524 329 Gene3D - 32 329 - -
Cca06g01524 329 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Cca06g01524 329 PANTHER PEROXIDASE 3 329 - -
Cca06g01524 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 190 200 IPR019793 -
Cca06g01524 329 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01524 329 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01524 329 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01524 329 PRINTS Plant peroxidase signature 123 133 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01524 329 PRINTS Plant peroxidase signature 142 157 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01524 329 PRINTS Plant peroxidase signature 189 201 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01524 329 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01524 329 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601|GO:0006979|GO:0020037
Cca06g01524 329 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01524 Cca-Chr6 30203103 30205440 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01524 1 326 Peroxidase AT3G49960 66.061 2.95e-162 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01524 K00430 - gmx:100815654 605.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01524 06 30203103 30205440 Cca11g02414 11 51018713 51021347 PCT
Cca11g01407 11 35972052 35974734 Cca06g01524 06 30203103 30205440 PCT