Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01514 ATGCTTAACATGGAGACGTTTAAGAAATCTTTCTGTGCAACTATTTTTGTTTTGTTTTTGGTACTTTGCGATGTTTCTCTAGCTACAATTGAGAAGAAAACGGAGAACCAACAAAGTACGTACATTGTCCACGTGGCTAAATCCGAAATGCCAACAAGCTTCGATCACCACTCAGTCTGGTATGAATCGATTATGAAATCAATATCCAACTCGACAAAAATGCTTTACACGTACGAAAACGCGATTCATGGATTCTCAACAAGACTAACACCTGAAGAAGCCTTGTTGCTAAAGAGCCGAACTGGGATTCTAAAGGTGGTAGCGGAGAAAATTTACAAGCCACTCACAACACGAACACCGCACTTCCTTGGGCTCAATAAAATCGCTAATATATTTCCCAAATCAAATCAAGGAAGTGACGTCATTATCGGAATCCTCGACACTGGTGTTTGGCCCGAAAGCAAGAGCTTCGACGACACCGGACTGGGACCCATCCCTAGTAACTGGAAAGGCGAATGTGAAATAGGTGACAATTTCACTGCTTCAAATTGCAACAAGAAATTGATAGGAGCTAGGTTCTTCGTAAAAGGTTACGAGGTCTCGATGGGTCCTGTTACTGATATCAAGCATTCTAAATCGCCACGAGACGATGACGGCCACGGCACCCACACTGCAAGCATAGCTGCAGGGTCTGCAGTGAATGGCGCGAACCTCTTCGGTTTCGCTTCCGGTACGGCTCGTGGGATGGCCTCACACGCGAGAGTGGCTGTCTACAAGGTTTGTTGGGGAGATTCTTGTGTTGAGTCTGATATAATGGCAGGACTTGACGCCGCCATTTCTGACAACGTTAATGTCATTTCAGCATCACTCGGAGGAGAAGCAGTGGATTACGACGTCGACCACTTCGCAATTGGAGCCTTTGCAGCAATGGAGAAAGGGATTATAGTTTCATGCGCTGCTGGGAACACAGGTCCTTATCGCTATACTGTCCAAAATATAGCACCTTGGATGATGTCTGTTGGAGCTGGCACAATAGATCGTGATTTCCCAGCGTACGTTATCCTCGGGAACGGACAAAACTTCTCTGGAGTGTCACTTTATGATGGCAAGTATTTGCCCAATACTCCTGTGTCATTCATATACGCAGGGAATGCAAGCGCAAATAAGGGTGGAGAGGTGTGTGAGTTAGATAGCTTGGATCCGGAAAAGGTTAAGGGGAAAATTGTGCTGTGTGACCAAGGACAAAATTCTGGGGTGGAGAAAGGACTCGTGGTGAAATCTGCTGGTGGTTTGGGCATGGTGTTGGCCAATGTGGAATCCAACGGAGAGGAATTGGTCGCAGAAGCCCATCTTTTACCAGCCTCTGCAGTGGGCTTCAAGGCTGCGAAAGCCTTAAAAGAGTACTTAACATCGACTCAAAAACCAACAGCTACACTTGTGTTTCAAGGAACAAGAGTTGGAATTAAGCCAGCACCGGTTGTCACAGCATTTAGCTCTCGAGGCCCAAGTAAAATCACACCAGAGATATTGAAGCCTGATCTCATTGCGCCAGGTGTCAACATCTTAGCAGCATGGACGGAGCTTGTAGGTCCCACTAACATGGTCCAAGATAATAGGCGCGTGGACTTCAACATACTCTCGGGCACATCCATGTCATGTCCTCACGCGAGCGGTATAGCGGCTTTGGTCAAGTCGGTTTATCCAAATTGGAGCCCAGCTGCGATTCGCTCTGCACTAATGACCACAGCTTATGCAACTTACAACGATGGTCAAAAACTGCTGGATAGTGCCACAAACGGGCCATCAACACCGTTTGATGTTGGTGCTGGACATGTGAACCCGGTTGCTGCACTTAATCCAGGGCTTGTCTATGATTTGACAGCGGATGATTATCTCAACCTCCTTTGTGCATTAAACTACTCATCTGATATGATTGAGGTCGTGGCTAGGAGAAAGTTCACATGTGATGCACAAAAACGCTACAGTGTAACGGACTTAAATTACCCTTCATTTGGTGTGGTGTTTAAACCAATAGCGAGTGGGAATGGTGCAACGACTGTTAAACACACGCGGACTCTAACTAATGTGGCGGCCGCAGGAACATACAAGGTATCGACTACGTTGGATATTCCATCTGTCAATATCACGGTAGAGCCAAGCGTGTTGAGCTTTAACAAAAATGAGAATAAATCATATACAGTAACATTTACGACATCAGATCCACCACCACCGAGTCATTTTGGTTTTGGGCGTTTAGAATGGTCAAATGGAAAAAACATTGTTGGAAGTCCTATCTCAGTTATGTGGGACTCTTGA 2316 0.459 MLNMETFKKSFCATIFVLFLVLCDVSLATIEKKTENQQSTYIVHVAKSEMPTSFDHHSVWYESIMKSISNSTKMLYTYENAIHGFSTRLTPEEALLLKSRTGILKVVAEKIYKPLTTRTPHFLGLNKIANIFPKSNQGSDVIIGILDTGVWPESKSFDDTGLGPIPSNWKGECEIGDNFTASNCNKKLIGARFFVKGYEVSMGPVTDIKHSKSPRDDDGHGTHTASIAAGSAVNGANLFGFASGTARGMASHARVAVYKVCWGDSCVESDIMAGLDAAISDNVNVISASLGGEAVDYDVDHFAIGAFAAMEKGIIVSCAAGNTGPYRYTVQNIAPWMMSVGAGTIDRDFPAYVILGNGQNFSGVSLYDGKYLPNTPVSFIYAGNASANKGGEVCELDSLDPEKVKGKIVLCDQGQNSGVEKGLVVKSAGGLGMVLANVESNGEELVAEAHLLPASAVGFKAAKALKEYLTSTQKPTATLVFQGTRVGIKPAPVVTAFSSRGPSKITPEILKPDLIAPGVNILAAWTELVGPTNMVQDNRRVDFNILSGTSMSCPHASGIAALVKSVYPNWSPAAIRSALMTTAYATYNDGQKLLDSATNGPSTPFDVGAGHVNPVAALNPGLVYDLTADDYLNLLCALNYSSDMIEVVARRKFTCDAQKRYSVTDLNYPSFGVVFKPIASGNGATTVKHTRTLTNVAAAGTYKVSTTLDIPSVNITVEPSVLSFNKNENKSYTVTFTTSDPPPPSHFGFGRLEWSNGKNIVGSPISVMWDS 771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01514 771 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 29 769 - -
Cca06g01514 771 Pfam PA domain 394 465 IPR003137 -
Cca06g01514 771 Gene3D Peptidase S8/S53 domain 140 631 IPR036852 GO:0004252|GO:0006508
Cca06g01514 771 ProSiteProfiles Serine proteases, subtilase domain profile. 122 618 - -
Cca06g01514 771 CDD Peptidases_S8_3 112 584 IPR034197 -
Cca06g01514 771 Gene3D - 635 769 - -
Cca06g01514 771 Pfam Peptidase inhibitor I9 40 113 IPR010259 -
Cca06g01514 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 548 558 IPR023828 -
Cca06g01514 771 Pfam Fibronectin type-III domain 665 767 IPR041469 -
Cca06g01514 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 114 IPR037045 -
Cca06g01514 771 Pfam Subtilase family 138 591 IPR000209 GO:0006508|GO:0008236
Cca06g01514 771 Gene3D - 346 487 - -
Cca06g01514 771 CDD PA_subtilisin_like 352 479 - -
Cca06g01514 771 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Cca06g01514 771 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Cca06g01514 771 PRINTS Subtilisin serine protease family (S8) signature 547 563 IPR015500 -
Cca06g01514 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 29 769 IPR045051 -
Cca06g01514 771 SUPERFAMILY Subtilisin-like 115 622 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01514 Cca-Chr6 30110775 30113090 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01514 11 769 Subtilisin-like Serine Gene Family AT5G67360 61.730 0.0 964
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01514 - - gmx:100801866 1217.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca06g01514 06 30110775 30113090 Cca11g01396 11 35814890 35818286 PCT