Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01513 ATGTTTAGCATGGATAGGTTTAAGAAACCTTTCTTTCCATGTATTTTTGTTTTGTTCGTGGTTCTTTGCGATGTATCTCTGGCAACAATCGAGAAGCCCGCACAAAAAAGTACTTTCATTGTCCATGTGGCCAAATCCGAAATGCCAGCAAGCTTAAATCACCATTCAGTGTGGTATAAATCTATCATAAAATCCATATCTGACTCCGCAGAAACGCTCTACACATATGACAACGCGATTCATGGATTCTCAACGAGACTAACATCTGACGAAGCCCGTTTACTCGAGAGTCAACCCGGGATTCTAAAAGTGCAACCGGAGAAAATGTACAAGCCACTCACAACTCGAACACCGCACTTCCTCGGGCTCGATAAGATCGCTGATATGTTCCCAGAATCAAATAATGCAACAAGTGACATCGTTATCGGACTCCTCGACACTGGTGTTTGGCCCGAAAGTAAGAGTTTCAACGACATTGGACTAGGACCCATCCCTGGGAGTTGGAGAGGCAAATGTGAATCAGGCACCAATTTCAGTGCCGCAAACTGCAATAAGAAATTGATAGGAGCCAGGTTCTTCATAAGTGGCTACGAGGCCTCAATGAAATTGCCCCTTAACGAAACCAACCAGGTTAGATCGCCACGAGATTCTGACGGCCACGGCACCCACACCGCAAGCACAGCCGCAGGGTCTGTAGTGGAAGGCGCGAGCCTCTTCGGGTACGCTTCTGGTACCGCACGTGGGATGGCCACACGTGCTAGAGTCGCTATCTACAAGGTTTGTTGGGCTGATACTTGTGCCAGTTCTGATATACTGGCTGGAATGGATGCAGCCATCGCTGACAACGTCAATGTCATTTCCGCATCAATCGGAGGTGGAGCAGTCGATTACGACGTCGAAAGCCTCGCAATTGGAGCCTTCGCAGCAATGGAGAAAGGGATTATAGTTTCCTGTGCTGGAGGAAACGAAGGACCAGTAAACTCTTCTGTCCAAAACATAGCACCTTGGGTGATCACCGTGGGAGCGGGCACACTTGATCGTGATTTCCCGGCGTACGTTAGCCTCGGGAATGGAAAAAACTATTATGGAGTGTCAATTTACGATGGTAATAGTCATAGTCATTTTCCCGATAGTTCTGCCTCCCTGCCATTCATATATGCAGGGAATGCAAGTGTAAAAATAGGTGCAGAGGAGTGCGAGAGAGACAGCTTGGATCCTAAAAAGGTTAAGGGGAAAATTGTGTTGTGTGATCGTGGAGGTAGTTCTAGGGCAGAGAAAGGACTTGTGGTGAAATCCGCGGGTGGTGTGGGCATGGTGTTGGCCAACGCCCAATCCAACGGAGAAGAATTAGTAGCAGATGCTCATCTTTTGCCAGCAGTTGCCGTGGGTTACAAGGACGGGAATGCCATCAGGCTTTACTTGTCACGTTCTGAAAAACCAACAACGGCTAGCCTTGTGTTTAAGGGAACCAAGGTTGGAATTAAGCCATCGCCGGTTGTCACGTCATATAGCTCGCGGGGCCCAAACCCAATCACGCCAGAGATATTGAAGCCGGATCTCATTGCGCCAGGTGTCAACATCTTAGCGGCGTATACGAAGCTTGCGAGTCCCACTGATCTCGCCCAAGACGATAGGCGCGTGGACTACAACATAATCTCAGGCACATCCATGTCATGCCCTCACGTGAGCGGTGTAGCGGCTCTGATCAAGTCGGTTTATCCAAATTGGAGCCCAGCCGCGATTCGATCTGCGCTAATGACCACAGCATATTCGACTTACGCCAACGGTGAGAAGCTAATTGATAGTGCCACAGACCTTCCGTCAACGCCGTTTGATATCGGTGCCGGACACGTGGACCCTGTCGCTGCGCTTAATCCAGGGCTTGTCTATGATTTGACACCACACGATTATCTCAACTTCCTTTGTGCATTAAACTACACACCTAAAAGGATCAAGGCTGTTGCGAGGAGAAAGTTCGCATGCGATGCACACAAGCAATACAGCGTAACGGACTTAAATTACCCTTCATTTGGTGTGGTGTTTAAACCAATTGCGGGTGGGAACGGTGCAGTACCGATTGTTAAACACACGCGAACTCTTACTAATGTTGGTGCCGCAGGAACATACAAGGTGTCGTTTAAGTTGGATTTCGAATGTGCCAATATCACAGTTGAGCCAAAGGTGTTGAGCTTCAACAAAAATGAGAAAAAATCGTATACAGTAACGTTCGTGTTAGTAAATCAAATTAACTGCTTTGGACGATTAGAATGGTCAAATGGAAAGAATGTTGTCGGAAGTCCTATCTCTATTTTATGGGACAATAGCACGTCGTAG 2334 0.4769 MFSMDRFKKPFFPCIFVLFVVLCDVSLATIEKPAQKSTFIVHVAKSEMPASLNHHSVWYKSIIKSISDSAETLYTYDNAIHGFSTRLTSDEARLLESQPGILKVQPEKMYKPLTTRTPHFLGLDKIADMFPESNNATSDIVIGLLDTGVWPESKSFNDIGLGPIPGSWRGKCESGTNFSAANCNKKLIGARFFISGYEASMKLPLNETNQVRSPRDSDGHGTHTASTAAGSVVEGASLFGYASGTARGMATRARVAIYKVCWADTCASSDILAGMDAAIADNVNVISASIGGGAVDYDVESLAIGAFAAMEKGIIVSCAGGNEGPVNSSVQNIAPWVITVGAGTLDRDFPAYVSLGNGKNYYGVSIYDGNSHSHFPDSSASLPFIYAGNASVKIGAEECERDSLDPKKVKGKIVLCDRGGSSRAEKGLVVKSAGGVGMVLANAQSNGEELVADAHLLPAVAVGYKDGNAIRLYLSRSEKPTTASLVFKGTKVGIKPSPVVTSYSSRGPNPITPEILKPDLIAPGVNILAAYTKLASPTDLAQDDRRVDYNIISGTSMSCPHVSGVAALIKSVYPNWSPAAIRSALMTTAYSTYANGEKLIDSATDLPSTPFDIGAGHVDPVAALNPGLVYDLTPHDYLNFLCALNYTPKRIKAVARRKFACDAHKQYSVTDLNYPSFGVVFKPIAGGNGAVPIVKHTRTLTNVGAAGTYKVSFKLDFECANITVEPKVLSFNKNEKKSYTVTFVLVNQINCFGRLEWSNGKNVVGSPISILWDNSTS 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01513 777 CDD PA_subtilisin_like 352 482 - -
Cca06g01513 777 ProSitePatterns Serine proteases, subtilase family, serine active site. 554 564 IPR023828 -
Cca06g01513 777 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 112 IPR037045 -
Cca06g01513 777 CDD Peptidases_S8_3 110 590 IPR034197 -
Cca06g01513 777 Gene3D - 346 493 - -
Cca06g01513 777 ProSiteProfiles Serine proteases, subtilase domain profile. 120 624 - -
Cca06g01513 777 PANTHER TRIPEPTIDYL-PEPTIDASE II-RELATED 27 773 - -
Cca06g01513 777 Gene3D - 641 771 - -
Cca06g01513 777 Gene3D Peptidase S8/S53 domain 139 637 IPR036852 GO:0004252|GO:0006508
Cca06g01513 777 SUPERFAMILY PA domain 356 463 IPR046450 -
Cca06g01513 777 Pfam Subtilase family 138 592 IPR000209 GO:0006508|GO:0008236
Cca06g01513 777 Pfam Peptidase inhibitor I9 38 111 IPR010259 -
Cca06g01513 777 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 27 773 IPR045051 -
Cca06g01513 777 Pfam PA domain 392 470 IPR003137 -
Cca06g01513 777 Pfam Fibronectin type-III domain 671 770 IPR041469 -
Cca06g01513 777 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Cca06g01513 777 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Cca06g01513 777 PRINTS Subtilisin serine protease family (S8) signature 553 569 IPR015500 -
Cca06g01513 777 SUPERFAMILY Subtilisin-like 113 628 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01513 Cca-Chr6 30104662 30107106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01513 18 772 Subtilisin-like Serine Gene Family AT5G67360 63.075 0.0 947
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01513 - - gmx:100801866 1192.18