Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01501 ATGGAAGACATCCTTAACAACATCGTTTACGCTCTCATATTTCTTGTCACTCTAAAACTTTTGTTTTTCAGAAAGAGAGTGAAAAACCCACCACCAAGTCCACCGTCTCTTCCACTGATCGGCAACCTCCACCAGTTGAAACCACCAATCCACCGCACCCTGCACTCCATCTCGCAGAAACGTGGCCCCATTTTCTCTCTCCGATTCGGGTCCCAACCCGTCCTCGTGGTTTCATCCGCTTCCGCCGCCGAAGAATGCTTCACCAAAAACGACATCGTTTTCGCGGACCGTTTCCGCTCCGCCTTGACCAAGCACCTCGGCTTCAACCACACGATCATCACAGCGTCGTCGTACGGCGACCACTGGCGCAACTTGCGGCGCATAAGCTCCCTGGAGATTCTCTCGAACCACCGCCTCAACTCCTTTTTGGGAATCCGAAGGGACGAGACGGCGAAGTTGCTTCGGAAGCTCTCTCATGAGGAGTTCACTAGGGTGGAGCTGAGGCCCATGTTTGCGGAGCTAACGTTCAACATTATCATGAGAATGGTGTGTGGGAAACGCTACTACGGCGAGGAACACGATGGGACCAGCGCCGAGGAGGCTAAGAAGTTTAGAACGTTGATGAGCGAATTATCGCAGTTCGGGTTGGGGTCCAACCTTGCAGACTTTGTGCCAGTTTTGAGTTTCTTCTGTTTTAGTCGTCACAGAAAGTTGGCAGAGGCTGGTGAGAAGCTAGACGCGTTCTTCCAGGGTCTCATCGATGAACAACGGAATAAGAAGGAAAGTTCAAATACCATGATTGGCCATTTGCTTTCCTCGCAGGAGTCACAACCTGAGTACTACACTGACCAAATTATCAAAGGCCTTATCATGGCGTTATATGTTGCTGGAACAGAGACTTCTGCTGTAGCATTAGAGTGGGCCATGGCCAATTTGTTGAACCATCCAGAAGTGTTGGAGAAAGCAAGGATTGAAATAGACACTGAAGTTGGACAAGAGCGTTTAATAGAAGAAGCGGATGTTGCCAAATTACCATATCTTCATAACATAATCTCCGAGACTCTGCGATTGCATCCACCAGTGCCTATGTTGCTTCCTCATTATTCTTCCCAAGACTGCACCGTCGGAGGATATGACGTGCCACGGAACACCTTGTTAATGGTGAATGCGTGGGCCATTCACAGGGACCCGGAGCTGTGGGCTGACCCCACAAGCTTTAAGCCCGAGAGGTTTGAGAATGGCCCAGTTGACGCCCACAAGCTGATCCCTTTTGGGCTGGGGCGAAGGGCGTGTCCTGGTGCAGCCATGGCCCAAAGAACTTTGGGCTTGACTTTAGGGTCGTTGATTCAATGCTTTGAGTGGAAGAGGATTGGGGAGGAAGAAGTTGACTTGAGCGAAGGATGGGGAACTATAGTGCACAAGACCATTCCATTGGAGGCCCAATGCAAAGCTCGTCCAATCATCAGCAAGATTTTCTGA 1479 0.503 MEDILNNIVYALIFLVTLKLLFFRKRVKNPPPSPPSLPLIGNLHQLKPPIHRTLHSISQKRGPIFSLRFGSQPVLVVSSASAAEECFTKNDIVFADRFRSALTKHLGFNHTIITASSYGDHWRNLRRISSLEILSNHRLNSFLGIRRDETAKLLRKLSHEEFTRVELRPMFAELTFNIIMRMVCGKRYYGEEHDGTSAEEAKKFRTLMSELSQFGLGSNLADFVPVLSFFCFSRHRKLAEAGEKLDAFFQGLIDEQRNKKESSNTMIGHLLSSQESQPEYYTDQIIKGLIMALYVAGTETSAVALEWAMANLLNHPEVLEKARIEIDTEVGQERLIEEADVAKLPYLHNIISETLRLHPPVPMLLPHYSSQDCTVGGYDVPRNTLLMVNAWAIHRDPELWADPTSFKPERFENGPVDAHKLIPFGLGRRACPGAAMAQRTLGLTLGSLIQCFEWKRIGEEEVDLSEGWGTIVHKTIPLEAQCKARPIISKIF 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01501 492 SUPERFAMILY Cytochrome P450 31 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01501 492 Pfam Cytochrome P450 31 474 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01501 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 424 433 IPR017972 GO:0005506|GO:0016705
Cca06g01501 492 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01501 492 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01501 492 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01501 492 PRINTS E-class P450 group I signature 285 302 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01501 492 PRINTS E-class P450 group I signature 305 331 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01501 492 PRINTS E-class P450 group I signature 348 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01501 492 PRINTS E-class P450 group I signature 389 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01501 492 PRINTS E-class P450 group I signature 421 431 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01501 492 PRINTS E-class P450 group I signature 431 454 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01501 492 Gene3D Cytochrome P450 23 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01501 492 PRINTS P450 superfamily signature 296 313 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01501 492 PRINTS P450 superfamily signature 349 360 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01501 492 PRINTS P450 superfamily signature 422 431 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01501 492 PRINTS P450 superfamily signature 431 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Cca06g01501 492 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 488 - -
Cca06g01501 492 PANTHER CYTOCHROME P450 FAMILY PROTEIN 8 488 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01501 Cca-Chr6 29955370 29957388 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01501 8 492 Cytochrome P450 AT4G37370 56.768 0.0 565
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01501 K13260 - gmx:100804509 820.846