Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01436 ATGAGGGACATGAAAACTTTACAAAAATTAGTGGCAAGTGATCCAGAGACGCTTCAAATGATGTCTGGCAAACCTTATGAGCCTAAATTTATGGATTTGTTGCTGTTGCAATGTGCACCACACTTTTACACTGAAGAACAGAAGGCTCAAATAAACCATTTTAAACAAAATTCAAGCGTTGAATCAAGATCAGAGACAAAGAATACTGCCGAGAAGAGAAAAATTGAAGAGATATCTGAAGAGGAAAGCGATACGTCAATGAATAAAAAACCAAGACAGGAAATAAACTATTCATCACCAGATTTGCCTACAAAATTCAAGAATCGATTTCCTGAGTTGAACAATGATGATTTTAAATTCCTTTTGAGCAAAAAACTCTATTCCTCAGATGTAGATCCTAATAAGAATCGTTTGTCGATGCCAGAAAATGAAATTGCATGTGATTTCCTTACAGAAGCTGAGGTTACAAAATTGTGTGAAAGAACTGAAAGTAACAATTTTGTTGGTGTAGAAGTAACCGTTTTGGACCCATGTCTCAGAGAATTTACTATCTTATTGAAGAGGTGGAAGATGAGGAGTACTTATACATACAACCTTTCAGCACGTTGGAAACATATTGTATCTGCTAATAAGTTCGAACAAGATCAAGAACTCGAAATATGGACTTGTAGGGCGAATAACAAGCTATATTTTCTATTAGAAAATGTTTAA 711 0.3474 MRDMKTLQKLVASDPETLQMMSGKPYEPKFMDLLLLQCAPHFYTEEQKAQINHFKQNSSVESRSETKNTAEKRKIEEISEEESDTSMNKKPRQEINYSSPDLPTKFKNRFPELNNDDFKFLLSKKLYSSDVDPNKNRLSMPENEIACDFLTEAEVTKLCERTESNNFVGVEVTVLDPCLREFTILLKRWKMRSTYTYNLSARWKHIVSANKFEQDQELEIWTCRANNKLYFLLENV 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01436 236 Gene3D - 111 235 IPR015300 -
Cca06g01436 236 MobiDBLite consensus disorder prediction 65 89 - -
Cca06g01436 236 SUPERFAMILY DNA-binding pseudobarrel domain 121 231 IPR015300 -
Cca06g01436 236 MobiDBLite consensus disorder prediction 52 101 - -
Cca06g01436 236 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 3 234 IPR005508 GO:0003677
Cca06g01436 236 PANTHER DUF313 DOMAIN PROTEIN 3 234 - -
Cca06g01436 236 Pfam B3 domain-containing protein At2g31720-like 115 208 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca06g01436 Cca-Chr6 29242753 29243550 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01436 112 233 B3 DNA Binding Superfamily AT1G05930 29.839 6.24e-10 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01436 - - gmx:102666575 233.032