Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca06g01423 ATGTCATTTTCGTTGTTCGCCACGCCGcagcaacagcaacagcaaccgcaaccgcagcagcagtctccgttccagccacagcaaagtagtctgttccttccccagcagcaacaacaacaacaacaatttcagccacaacagcagcaaccgcagccacaacagcaGTTGTTTTTGTTCACAAACGATAGAACTCCCGCTAGTTACAGTACAAATTGGGCGGATCTACATCCAGATTCTCAGAAGATTCTCCTTCAGATCGAGGAGCGGATATTGGAGTATAGGGATGAAAGCCAGAGACTAGATCAGTGTAGTCGTCTTTATGATTCTTCGGTCTCCAACGATGGATTTGAGCTCGATGCAGGCCATATTGTTCAGGAACTTGGTGGAATAAGCACTGCTATGGAACGGCAGAAAACTTTGCTGCAAGAACTGATGTCCACAGTTAAGGATATGTTACGCAACACAGAGGTTGCTGTTCGTTCCTTTATGATGCTACGCCCAAGGTTCCTTCATCCCAGTGGGGGTACATCAAGTGCCACTGCTCCATCACAGACTCCTGGAGCAACTATAGCAGCTAGTTCAAGTAGCCAGCCAACATCATCTATAGTGCCTGTTTTTGATTTCTACAGTGGTCTTCCAAAGAAACCATCACCCTTTTTACAGCAAACAGTTTTAAGATTTGAGAAGTATCTTGTTGAGTGCCATCAGTTAATTGAAGAGTTGGAGCAGTTGCTTCTCTTAGACTCTGAGAGAAATGCTTCCAGTAATGGATCCTCATTATTGCAATCTCTTCCCAAGGTCATGACAAATGTGCACGACTTTTTTGTTCATGTGGCTGCAAAGGTGGAGAACATTCATCAGTACATTGAATCTATGAAATCAGCATACCTAGCTGATCGGCGTCGCCGGGGGGAAGTGAATGATCCATTTTTGGAGGCAGATCGGCGAGAAACTGCAAGACAAGAAGCTGCCTCGAAAAGAGTTCATCCGACATTGCATTTACCTGCAAATTCACAACCCTCAACTCAAGTTGCTGGGTTGTTTTCCAGTTCAGGGACTCAAGCAGCATTGACTGCCCCGCAGACATCTGCCGCAACTTCATCTTCATCATCAGGAAGTGGATTCTCTCTTTTTAGCACGCCGTCTTCTGCTTCGTCGTCTTCTATGTTGTCATCTCTGTTTGCAACACCAACTCCTGCTCCAGGACCTCAAACCTCACTTTTTGGTTCTACAACATCTGTACCTGGTGCTGCATCAACTCCCTCTCTGTTTGGTAATACTACTCCATTGTTTGGTACGGCACAAGCTACAAATTCACTGTTTTCATCTCCATTTGTTTCAGGTGGTGCAACAGGATCTGGGGCTAGCTTCGGACCTGGATCGAAGAATCCGCGGGCGAAATCCAGAACTGCTCGACGCTAA 1422 0.4128 MSFSLFATPQQQQQQPQPQQQSPFQPQQSSLFLPQQQQQQQQFQPQQQQPQPQQQLFLFTNDRTPASYSTNWADLHPDSQKILLQIEERILEYRDESQRLDQCSRLYDSSVSNDGFELDAGHIVQELGGISTAMERQKTLLQELMSTVKDMLRNTEVAVRSFMMLRPRFLHPSGGTSSATAPSQTPGATIAASSSSQPTSSIVPVFDFYSGLPKKPSPFLQQTVLRFEKYLVECHQLIEELEQLLLLDSERNASSNGSSLLQSLPKVMTNVHDFFVHVAAKVENIHQYIESMKSAYLADRRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQAALTAPQTSAATSSSSSGSGFSLFSTPSSASSSSMLSSLFATPTPAPGPQTSLFGSTTSVPGAASTPSLFGNTTPLFGTAQATNSLFSSPFVSGGATGSGASFGPGSKNPRAKSRTARR 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca06g01423 473 MobiDBLite consensus disorder prediction 308 327 - -
Cca06g01423 473 MobiDBLite consensus disorder prediction 173 198 - -
Cca06g01423 473 MobiDBLite consensus disorder prediction 332 346 - -
Cca06g01423 473 MobiDBLite consensus disorder prediction 1 52 - -
Cca06g01423 473 Gene3D - 215 305 - -
Cca06g01423 473 MobiDBLite consensus disorder prediction 388 415 - -
Cca06g01423 473 MobiDBLite consensus disorder prediction 172 198 - -
Cca06g01423 473 Coils Coil 134 154 - -
Cca06g01423 473 PANTHER NUCLEOPORIN P58/P45 5 470 - -
Cca06g01423 473 MobiDBLite consensus disorder prediction 308 346 - -
Cca06g01423 473 MobiDBLite consensus disorder prediction 450 473 - -
Cca06g01423 473 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 5 470 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca06g01423 56 473 NAC Transcription Factor Family AT4G37130 64.269 1.95e-177 505
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca06g01423 K14307 - gmx:100776992 699.893